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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
409.0
nTPM
Monaco:
90.0
nTPM
Schmiedel:
46.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
409.0
HPA sample
nTPM
gdT-cell nTPM: 283.3
Samples: 6
Max nTPM: 350.3
Min nTPM: 222.9
P10809_1007
222.9
P10809_1022
293.2
P10809_1041
350.3
P10809_1060
270.1
P10809_1077
289.2
P10809_1098
274.0
MAIT T-cell nTPM: 287.7
Samples: 6
Max nTPM: 353.1
Min nTPM: 180.5
P10809_1006
180.5
P10809_1024
287.5
P10809_1043
353.1
P10809_1062
332.3
P10809_1083
256.7
P10809_1097
315.9
Memory CD4 T-cell nTPM: 342.7
Samples: 6
Max nTPM: 429.0
Min nTPM: 254.4
P10809_1014
254.4
P10809_1026
426.1
P10809_1045
276.2
P10809_1064
429.0
P10809_1086
334.4
P10809_1113
336.1
Memory CD8 T-cell nTPM: 316.6
Samples: 5
Max nTPM: 393.5
Min nTPM: 227.4
P10809_1012
227.4
P10809_1027
342.6
P10809_1046
293.6
P10809_1065
393.5
P10809_1111
325.9
Naive CD4 T-cell nTPM: 325.2
Samples: 6
Max nTPM: 413.5
Min nTPM: 199.0
P10809_1015
199.0
P10809_1030
336.9
P10809_1049
413.5
P10809_1068
375.7
P10809_1085
309.3
P10809_1112
316.6
Naive CD8 T-cell nTPM: 315.0
Samples: 6
Max nTPM: 416.2
Min nTPM: 266.9
P10809_1016
266.9
P10809_1031
330.5
P10809_1050
289.4
P10809_1069
416.2
P10809_1087
317.3
P10809_1110
269.7
T-reg nTPM: 409.0
Samples: 6
Max nTPM: 570.6
Min nTPM: 277.3
P10809_1018
277.3
P10809_1037
340.6
P10809_1056
570.6
P10809_1075
453.3
P10809_1094
410.1
P10809_1106
402.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
90.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 59.6
Samples: 4
Max nTPM: 64.3
Min nTPM: 55.2
RHH5202_R3573
56.9
RHH5230_R3602
62.1
RHH5259_R3631
55.2
RHH5288_R3660
64.3
Effector memory CD8 T-cell nTPM: 64.4
Samples: 4
Max nTPM: 74.4
Min nTPM: 50.2
RHH5203_R3574
64.3
RHH5231_R3603
74.4
RHH5260_R3632
50.2
RHH5289_R3661
68.6
MAIT T-cell nTPM: 79.9
Samples: 4
Max nTPM: 90.3
Min nTPM: 58.6
RHH5233_R3605
90.3
RHH5205_R3576
58.6
RHH5262_R3634
88.6
RHH5297_R3663
81.9
Memory CD4 T-cell TFH nTPM: 74.7
Samples: 4
Max nTPM: 93.5
Min nTPM: 53.6
RHH5300_R3666
80.2
RHH5236_R3608
93.5
RHH5265_R3637
53.6
RHH5208_R3579
71.3
Memory CD4 T-cell Th1 nTPM: 69.1
Samples: 4
Max nTPM: 73.2
Min nTPM: 62.9
RHH5210_R3581
67.1
RHH5302_R3668
73.2
RHH5238_R3610
73.0
RHH5267_R3639
62.9
Memory CD4 T-cell Th1/Th17 nTPM: 80.5
Samples: 4
Max nTPM: 95.0
Min nTPM: 70.5
RHH5303_R3669
95.0
RHH5211_R3582
85.5
RHH5239_R3611
70.5
RHH5268_R3640
70.8
Memory CD4 T-cell Th17 nTPM: 62.6
Samples: 4
Max nTPM: 67.5
Min nTPM: 52.8
RHH5304_R3670
63.3
RHH5212_R3583
66.7
RHH5240_R3612
67.5
RHH5269_R3641
52.8
Memory CD4 T-cell Th2 nTPM: 81.6
Samples: 4
Max nTPM: 99.6
Min nTPM: 68.0
RHH5305_R3671
99.6
RHH5213_R3584
77.8
RHH5241_R3613
81.1
RHH5270_R3642
68.0
Naive CD4 T-cell nTPM: 79.9
Samples: 4
Max nTPM: 94.6
Min nTPM: 68.9
RHH5306_R3672
68.9
RHH5214_R3585
94.6
RHH5242_R3614
78.4
RHH5271_R3643
77.8
Naive CD8 T-cell nTPM: 72.6
Samples: 4
Max nTPM: 84.2
Min nTPM: 61.2
RHH5201_R3572
72.5
RHH5229_R3601
72.5
RHH5258_R3630
61.2
RHH5287_R3659
84.2
Non-Vd2 gdTCR nTPM: 62.3
Samples: 4
Max nTPM: 75.6
Min nTPM: 52.0
RHH5235_R3607
52.0
RHH5264_R3636
59.3
RHH5207_R3578
62.2
RHH5299_R3665
75.6
T-reg nTPM: 77.5
Samples: 4
Max nTPM: 104.0
Min nTPM: 45.2
RHH5301_R3667
97.4
RHH5237_R3609
104.0
RHH5266_R3638
45.2
RHH5209_R3580
63.4
Terminal effector memory CD4 T-cell nTPM: 70.4
Samples: 2
Max nTPM: 82.0
Min nTPM: 58.7
RHH5243_R3615
58.7
RHH5272_R3644
82.0
Terminal effector memory CD8 T-cell nTPM: 82.7
Samples: 4
Max nTPM: 94.2
Min nTPM: 76.1
RHH5232_R3604
76.1
RHH5204_R3575
94.2
RHH5261_R3633
80.0
RHH5296_R3662
80.3
Vd2 gdTCR nTPM: 90.0
Samples: 4
Max nTPM: 120.3
Min nTPM: 62.8
RHH5234_R3606
76.7
RHH5206_R3577
120.3
RHH5263_R3635
62.8
RHH5298_R3664
100.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
