HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:43.7 nTPM
HPA Brain:20.8 nTPM
GTEx:43.7 nTPM
FANTOM5:52.5 Scaled Tags Per Million
Pig:59.6 nTPM
Mouse:43.1 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA062681
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.8
Sample id Sample description nTPM
Hippocampus
nTPM: 20.8
1855 Male, age 76, left hemisphere 26.0
1898 Male, age 80, left hemisphere 23.7
2529 Female, age 94, left hemisphere 21.0
1911 Female, age 85, right hemisphere 19.5
2621 Female, age 67, right hemisphere 18.5
2148 Female, age 91, left hemisphere 15.9
Dentate gyrus
nTPM: 19.5
2010 Male, age 76, both hemispheres 24.6
1927 Female, age 91, both hemispheres 20.8
2528 Male, age 74, both hemispheres 20.5
2530 Female, age 94, left hemisphere 20.5
2246 Female, age 85, both hemispheres 17.8
2531 Female, age 67, both hemispheres 12.6
Entorhinal gyrus
nTPM: 18.7
1787 Male, age 76, left hemisphere 21.9
2117 Female, age 91, right hemisphere 21.5
2764 Male, age 80, right hemisphere 21.1
1938 Female, age 85, left hemisphere 19.6
2686 Male, age 75, right hemisphere 14.5
2613 Female, age 94, left hemisphere 13.3
Hippocampus, CA1
nTPM: 20.6
2749 Male, age 80, left hemisphere 29.4
2527 Male, age 74, both hemispheres 21.4
1873 Female, age 85, both hemispheres 20.3
2045 Male, age 76, both hemispheres 16.5
2082 Female, age 91, right hemisphere 15.3
Hippocampus, CA2
nTPM: 20.7
1963 Male, age 80, left hemisphere 27.3
2249 Male, age 74, both hemispheres 22.9
1892 Male, age 76, both hemispheres 21.5
2437 Female, age 94, left hemisphere 19.3
1940 Female, age 85, left hemisphere 17.3
2113 Female, age 91, right hemisphere 16.0
Hippocampus, CA3
nTPM: 19.2
2436 Male, age 74, both hemispheres 22.8
2137 Male, age 80, left hemisphere 20.7
1891 Female, age 85, both hemispheres 19.8
1867 Male, age 76, both hemispheres 18.8
2620 Female, age 94, left hemisphere 16.5
2861 Female, age 67, both hemispheres 16.4
Parahippocampal cortex
nTPM: 17.6
1850 Male, age 80, both hemispheres 21.1
2250 Female, age 67, right hemisphere 20.7
2245 Female, age 91, both hemispheres 19.1
2018 Male, age 76, both hemispheres 18.7
1990 Female, age 91, right hemisphere 18.4
1933 Female, age 85, both hemispheres 18.2
2532 Female, age 72, left hemisphere 17.4
2692 Male, age 74, both hemispheres 15.7
2622 Female, age 67, right hemisphere 13.6
2693 Female, age 94, both hemispheres 13.6
Perirhinal gyrus
nTPM: 19.9
1794 Male, age 80, right hemisphere 24.6
1847 Female, age 91, left hemisphere 23.1
2521 Female, age 94, right hemisphere 18.4
1841 Female, age 85, right hemisphere 17.3
2848 Male, age 76, right hemisphere 16.4
Subiculum
nTPM: 17.1
1901 Male, age 80, both hemispheres 21.8
1977 Female, age 85, both hemispheres 20.8
2729 Female, age 91, right hemisphere 17.6
2042 Male, age 76, both hemispheres 17.2
2619 Male, age 74, both hemispheres 15.7
2438 Female, age 94, left hemisphere 9.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.7
Samples: 197

Max nTPM: 102.8
Min nTPM: 10.9
Std nTPM: 10.4
Median nTPM: 42.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 102.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 77.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 77.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 69.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 68.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 68.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 65.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 64.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 63.4
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 60.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 60.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.5
FF:10169-103B7 60 years, female 64.3
FF:10153-102I9 76 years, female 40.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.6
Pig sample Sample description nTPM
Subiculum
nTPM: 47.4
Samples: 4

Max nTPM: 68.6
Min nTPM: 39.4
Sample A Female 68.6
Sample B Female 41.7
Sample C Male 39.4
Sample D Male 39.8
Dorsal hippocampus
nTPM: 59.6
Samples: 4

Max nTPM: 80.6
Min nTPM: 45.4
Sample A Female 80.6
Sample B Female 60.4
Sample C Male 52.1
Sample D Male 45.4
Entorhinal cortex
nTPM: 55.0
Samples: 4

Max nTPM: 70.0
Min nTPM: 42.1
Sample A Female 54.4
Sample B Female 70.0
Sample C Male 53.4
Sample D Male 42.1
Ventral hippocampus
nTPM: 51.5
Samples: 4

Max nTPM: 61.6
Min nTPM: 38.3
Sample A Female 55.9
Sample B Female 38.3
Sample C Male 61.6
Sample D Male 50.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.8
Samples: 4

Max nTPM: 43.8
Min nTPM: 37.6
Sample A Male 37.6
Sample B Male 38.9
Sample C Female 43.8
Sample D Female 38.7
Hippocampal formation
nTPM: 43.1
Samples: 4

Max nTPM: 46.7
Min nTPM: 39.6
Sample A Male 46.7
Sample B Male 42.3
Sample C Female 39.6
Sample D Female 43.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
68410518 Antisense, RP_041214_02_A10, Mouse strain C57BL/6J (56 days, male) 0.8

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