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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
155.3
nTPM
Monaco:
208.8
nTPM
Schmiedel:
128.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
155.3
HPA sample
nTPM
gdT-cell nTPM: 109.8
Samples: 6
Max nTPM: 146.6
Min nTPM: 82.3
P10809_1007
82.3
P10809_1022
135.6
P10809_1041
146.6
P10809_1060
95.1
P10809_1077
84.3
P10809_1098
114.8
MAIT T-cell nTPM: 116.0
Samples: 6
Max nTPM: 154.6
Min nTPM: 80.4
P10809_1006
90.8
P10809_1024
154.6
P10809_1043
130.4
P10809_1062
95.7
P10809_1083
80.4
P10809_1097
143.8
Memory CD4 T-cell nTPM: 155.4
Samples: 6
Max nTPM: 200.7
Min nTPM: 125.6
P10809_1014
127.2
P10809_1026
200.7
P10809_1045
192.0
P10809_1064
131.6
P10809_1086
125.6
P10809_1113
155.0
Memory CD8 T-cell nTPM: 150.8
Samples: 5
Max nTPM: 182.7
Min nTPM: 113.8
P10809_1012
139.8
P10809_1027
141.9
P10809_1046
182.7
P10809_1065
113.8
P10809_1111
175.7
Naive CD4 T-cell nTPM: 146.1
Samples: 6
Max nTPM: 182.5
Min nTPM: 107.9
P10809_1015
121.1
P10809_1030
172.2
P10809_1049
182.5
P10809_1068
140.0
P10809_1085
107.9
P10809_1112
152.9
Naive CD8 T-cell nTPM: 144.2
Samples: 6
Max nTPM: 178.9
Min nTPM: 89.2
P10809_1016
135.8
P10809_1031
178.9
P10809_1050
170.1
P10809_1069
144.8
P10809_1087
89.2
P10809_1110
146.1
T-reg nTPM: 149.6
Samples: 6
Max nTPM: 193.0
Min nTPM: 110.1
P10809_1018
110.1
P10809_1037
155.9
P10809_1056
147.0
P10809_1075
133.3
P10809_1094
158.5
P10809_1106
193.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
208.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 171.7
Samples: 4
Max nTPM: 229.0
Min nTPM: 142.4
RHH5202_R3573
154.1
RHH5230_R3602
161.3
RHH5259_R3631
142.4
RHH5288_R3660
229.0
Effector memory CD8 T-cell nTPM: 198.9
Samples: 4
Max nTPM: 228.0
Min nTPM: 168.3
RHH5203_R3574
228.0
RHH5231_R3603
190.7
RHH5260_R3632
168.3
RHH5289_R3661
208.6
MAIT T-cell nTPM: 119.4
Samples: 4
Max nTPM: 129.5
Min nTPM: 111.4
RHH5233_R3605
124.1
RHH5205_R3576
129.5
RHH5262_R3634
112.5
RHH5297_R3663
111.4
Memory CD4 T-cell TFH nTPM: 168.6
Samples: 4
Max nTPM: 218.2
Min nTPM: 136.1
RHH5300_R3666
162.2
RHH5236_R3608
136.1
RHH5265_R3637
218.2
RHH5208_R3579
157.9
Memory CD4 T-cell Th1 nTPM: 166.3
Samples: 4
Max nTPM: 219.1
Min nTPM: 106.1
RHH5210_R3581
174.9
RHH5302_R3668
219.1
RHH5238_R3610
106.1
RHH5267_R3639
165.1
Memory CD4 T-cell Th1/Th17 nTPM: 163.6
Samples: 4
Max nTPM: 209.5
Min nTPM: 71.0
RHH5303_R3669
209.5
RHH5211_R3582
207.1
RHH5239_R3611
71.0
RHH5268_R3640
166.9
Memory CD4 T-cell Th17 nTPM: 144.0
Samples: 4
Max nTPM: 186.2
Min nTPM: 108.4
RHH5304_R3670
148.5
RHH5212_R3583
186.2
RHH5240_R3612
108.4
RHH5269_R3641
133.0
Memory CD4 T-cell Th2 nTPM: 208.8
Samples: 4
Max nTPM: 219.9
Min nTPM: 198.5
RHH5305_R3671
198.5
RHH5213_R3584
219.9
RHH5241_R3613
209.6
RHH5270_R3642
207.3
Naive CD4 T-cell nTPM: 154.1
Samples: 4
Max nTPM: 179.8
Min nTPM: 128.9
RHH5306_R3672
179.8
RHH5214_R3585
143.3
RHH5242_R3614
128.9
RHH5271_R3643
164.2
Naive CD8 T-cell nTPM: 132.0
Samples: 4
Max nTPM: 194.6
Min nTPM: 54.6
RHH5201_R3572
131.0
RHH5229_R3601
54.6
RHH5258_R3630
194.6
RHH5287_R3659
147.7
Non-Vd2 gdTCR nTPM: 161.5
Samples: 4
Max nTPM: 171.6
Min nTPM: 134.9
RHH5235_R3607
134.9
RHH5264_R3636
168.2
RHH5207_R3578
171.3
RHH5299_R3665
171.6
T-reg nTPM: 167.1
Samples: 4
Max nTPM: 194.8
Min nTPM: 153.8
RHH5301_R3667
194.8
RHH5237_R3609
153.8
RHH5266_R3638
159.6
RHH5209_R3580
160.2
Terminal effector memory CD4 T-cell nTPM: 181.1
Samples: 2
Max nTPM: 237.8
Min nTPM: 124.3
RHH5243_R3615
124.3
RHH5272_R3644
237.8
Terminal effector memory CD8 T-cell nTPM: 177.7
Samples: 4
Max nTPM: 205.8
Min nTPM: 115.1
RHH5232_R3604
191.6
RHH5204_R3575
198.3
RHH5261_R3633
115.1
RHH5296_R3662
205.8
Vd2 gdTCR nTPM: 136.1
Samples: 4
Max nTPM: 156.8
Min nTPM: 100.0
RHH5234_R3606
156.8
RHH5206_R3577
155.7
RHH5263_R3635
100.0
RHH5298_R3664
131.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
