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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
137.9
nTPM
Monaco:
93.5
nTPM
Schmiedel:
72.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
137.9
HPA sample
nTPM
gdT-cell nTPM: 105.7
Samples: 6
Max nTPM: 138.3
Min nTPM: 63.2
P10809_1007
63.2
P10809_1022
125.2
P10809_1041
136.0
P10809_1060
100.4
P10809_1077
71.2
P10809_1098
138.3
MAIT T-cell nTPM: 137.9
Samples: 6
Max nTPM: 179.9
Min nTPM: 82.1
P10809_1006
82.1
P10809_1024
179.9
P10809_1043
158.1
P10809_1062
121.5
P10809_1083
112.6
P10809_1097
173.1
Memory CD4 T-cell nTPM: 118.1
Samples: 6
Max nTPM: 149.5
Min nTPM: 82.9
P10809_1014
82.9
P10809_1026
149.5
P10809_1045
132.9
P10809_1064
118.6
P10809_1086
105.1
P10809_1113
119.8
Memory CD8 T-cell nTPM: 115.8
Samples: 5
Max nTPM: 150.0
Min nTPM: 78.0
P10809_1012
78.0
P10809_1027
114.2
P10809_1046
150.0
P10809_1065
122.5
P10809_1111
114.2
Naive CD4 T-cell nTPM: 119.7
Samples: 6
Max nTPM: 181.5
Min nTPM: 67.7
P10809_1015
67.7
P10809_1030
123.6
P10809_1049
181.5
P10809_1068
114.8
P10809_1085
108.4
P10809_1112
122.0
Naive CD8 T-cell nTPM: 116.2
Samples: 6
Max nTPM: 149.1
Min nTPM: 73.9
P10809_1016
73.9
P10809_1031
149.1
P10809_1050
120.2
P10809_1069
145.0
P10809_1087
88.1
P10809_1110
120.6
T-reg nTPM: 123.3
Samples: 6
Max nTPM: 163.3
Min nTPM: 61.9
P10809_1018
61.9
P10809_1037
151.0
P10809_1056
163.3
P10809_1075
116.1
P10809_1094
101.9
P10809_1106
145.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
93.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 65.2
Samples: 4
Max nTPM: 95.2
Min nTPM: 44.4
RHH5202_R3573
95.2
RHH5230_R3602
44.4
RHH5259_R3631
46.8
RHH5288_R3660
74.2
Effector memory CD8 T-cell nTPM: 75.4
Samples: 4
Max nTPM: 95.3
Min nTPM: 46.3
RHH5203_R3574
95.3
RHH5231_R3603
70.2
RHH5260_R3632
46.3
RHH5289_R3661
89.7
MAIT T-cell nTPM: 81.9
Samples: 4
Max nTPM: 114.7
Min nTPM: 58.1
RHH5233_R3605
114.7
RHH5205_R3576
58.1
RHH5262_R3634
75.9
RHH5297_R3663
79.0
Memory CD4 T-cell TFH nTPM: 93.6
Samples: 4
Max nTPM: 136.8
Min nTPM: 73.7
RHH5300_R3666
73.7
RHH5236_R3608
136.8
RHH5265_R3637
75.9
RHH5208_R3579
87.8
Memory CD4 T-cell Th1 nTPM: 67.2
Samples: 4
Max nTPM: 85.0
Min nTPM: 50.9
RHH5210_R3581
81.5
RHH5302_R3668
85.0
RHH5238_R3610
51.2
RHH5267_R3639
50.9
Memory CD4 T-cell Th1/Th17 nTPM: 70.2
Samples: 4
Max nTPM: 105.5
Min nTPM: 37.0
RHH5303_R3669
105.5
RHH5211_R3582
77.0
RHH5239_R3611
37.0
RHH5268_R3640
61.2
Memory CD4 T-cell Th17 nTPM: 64.8
Samples: 4
Max nTPM: 101.5
Min nTPM: 49.0
RHH5304_R3670
54.4
RHH5212_R3583
101.5
RHH5240_R3612
54.3
RHH5269_R3641
49.0
Memory CD4 T-cell Th2 nTPM: 76.2
Samples: 4
Max nTPM: 91.8
Min nTPM: 62.1
RHH5305_R3671
62.1
RHH5213_R3584
79.7
RHH5241_R3613
91.8
RHH5270_R3642
71.3
Naive CD4 T-cell nTPM: 69.1
Samples: 4
Max nTPM: 78.8
Min nTPM: 61.8
RHH5306_R3672
67.2
RHH5214_R3585
78.8
RHH5242_R3614
68.6
RHH5271_R3643
61.8
Naive CD8 T-cell nTPM: 64.4
Samples: 4
Max nTPM: 83.4
Min nTPM: 32.3
RHH5201_R3572
83.4
RHH5229_R3601
32.3
RHH5258_R3630
80.9
RHH5287_R3659
60.9
Non-Vd2 gdTCR nTPM: 64.8
Samples: 4
Max nTPM: 73.1
Min nTPM: 54.9
RHH5235_R3607
54.9
RHH5264_R3636
73.1
RHH5207_R3578
62.0
RHH5299_R3665
69.0
T-reg nTPM: 65.8
Samples: 4
Max nTPM: 91.0
Min nTPM: 43.9
RHH5301_R3667
68.9
RHH5237_R3609
91.0
RHH5266_R3638
43.9
RHH5209_R3580
59.4
Terminal effector memory CD4 T-cell nTPM: 60.0
Samples: 2
Max nTPM: 81.6
Min nTPM: 38.4
RHH5243_R3615
38.4
RHH5272_R3644
81.6
Terminal effector memory CD8 T-cell nTPM: 77.0
Samples: 4
Max nTPM: 95.2
Min nTPM: 37.5
RHH5232_R3604
86.6
RHH5204_R3575
95.2
RHH5261_R3633
37.5
RHH5296_R3662
88.7
Vd2 gdTCR nTPM: 72.0
Samples: 4
Max nTPM: 80.7
Min nTPM: 63.5
RHH5234_R3606
76.6
RHH5206_R3577
67.0
RHH5263_R3635
63.5
RHH5298_R3664
80.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
