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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
631.7
nTPM
Monaco:
72.4
nTPM
Schmiedel:
18.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
631.7
HPA sample
nTPM
gdT-cell nTPM: 321.3
Samples: 6
Max nTPM: 415.2
Min nTPM: 242.8
P10809_1007
261.0
P10809_1022
242.8
P10809_1041
377.8
P10809_1060
337.3
P10809_1077
415.2
P10809_1098
293.9
MAIT T-cell nTPM: 317.5
Samples: 6
Max nTPM: 382.1
Min nTPM: 190.0
P10809_1006
190.0
P10809_1024
382.1
P10809_1043
348.4
P10809_1062
305.7
P10809_1083
358.6
P10809_1097
319.9
Memory CD4 T-cell nTPM: 426.6
Samples: 6
Max nTPM: 533.5
Min nTPM: 285.2
P10809_1014
285.2
P10809_1026
533.5
P10809_1045
370.0
P10809_1064
485.5
P10809_1086
483.8
P10809_1113
401.3
Memory CD8 T-cell nTPM: 384.6
Samples: 5
Max nTPM: 533.5
Min nTPM: 239.9
P10809_1012
239.9
P10809_1027
533.5
P10809_1046
346.9
P10809_1065
431.4
P10809_1111
371.3
Naive CD4 T-cell nTPM: 326.9
Samples: 6
Max nTPM: 470.9
Min nTPM: 236.7
P10809_1015
236.7
P10809_1030
470.9
P10809_1049
286.7
P10809_1068
318.6
P10809_1085
365.3
P10809_1112
283.0
Naive CD8 T-cell nTPM: 338.0
Samples: 6
Max nTPM: 471.1
Min nTPM: 243.5
P10809_1016
243.5
P10809_1031
355.3
P10809_1050
347.3
P10809_1069
362.6
P10809_1087
471.1
P10809_1110
248.2
T-reg nTPM: 631.7
Samples: 6
Max nTPM: 764.3
Min nTPM: 401.9
P10809_1018
401.9
P10809_1037
764.3
P10809_1056
725.4
P10809_1075
650.7
P10809_1094
648.0
P10809_1106
599.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
72.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 54.9
Samples: 4
Max nTPM: 86.3
Min nTPM: 26.2
RHH5202_R3573
26.2
RHH5230_R3602
54.0
RHH5259_R3631
86.3
RHH5288_R3660
53.1
Effector memory CD8 T-cell nTPM: 53.8
Samples: 4
Max nTPM: 76.3
Min nTPM: 30.1
RHH5203_R3574
53.8
RHH5231_R3603
30.1
RHH5260_R3632
76.3
RHH5289_R3661
54.8
MAIT T-cell nTPM: 46.1
Samples: 4
Max nTPM: 52.6
Min nTPM: 41.0
RHH5233_R3605
42.2
RHH5205_R3576
52.6
RHH5262_R3634
48.5
RHH5297_R3663
41.0
Memory CD4 T-cell TFH nTPM: 45.9
Samples: 4
Max nTPM: 57.4
Min nTPM: 31.4
RHH5300_R3666
31.4
RHH5236_R3608
45.0
RHH5265_R3637
49.9
RHH5208_R3579
57.4
Memory CD4 T-cell Th1 nTPM: 64.4
Samples: 4
Max nTPM: 117.1
Min nTPM: 28.6
RHH5210_R3581
28.6
RHH5302_R3668
44.9
RHH5238_R3610
117.1
RHH5267_R3639
66.9
Memory CD4 T-cell Th1/Th17 nTPM: 54.3
Samples: 4
Max nTPM: 73.1
Min nTPM: 41.3
RHH5303_R3669
41.3
RHH5211_R3582
48.6
RHH5239_R3611
54.1
RHH5268_R3640
73.1
Memory CD4 T-cell Th17 nTPM: 55.4
Samples: 4
Max nTPM: 72.3
Min nTPM: 41.0
RHH5304_R3670
63.2
RHH5212_R3583
41.0
RHH5240_R3612
72.3
RHH5269_R3641
44.9
Memory CD4 T-cell Th2 nTPM: 41.2
Samples: 4
Max nTPM: 52.3
Min nTPM: 36.6
RHH5305_R3671
52.3
RHH5213_R3584
36.6
RHH5241_R3613
39.1
RHH5270_R3642
36.6
Naive CD4 T-cell nTPM: 50.6
Samples: 4
Max nTPM: 55.8
Min nTPM: 44.6
RHH5306_R3672
44.6
RHH5214_R3585
52.2
RHH5242_R3614
49.7
RHH5271_R3643
55.8
Naive CD8 T-cell nTPM: 39.4
Samples: 4
Max nTPM: 46.5
Min nTPM: 26.6
RHH5201_R3572
41.4
RHH5229_R3601
43.0
RHH5258_R3630
26.6
RHH5287_R3659
46.5
Non-Vd2 gdTCR nTPM: 50.7
Samples: 4
Max nTPM: 81.9
Min nTPM: 34.1
RHH5235_R3607
81.9
RHH5264_R3636
46.1
RHH5207_R3578
34.1
RHH5299_R3665
40.7
T-reg nTPM: 48.2
Samples: 4
Max nTPM: 56.3
Min nTPM: 38.9
RHH5301_R3667
38.9
RHH5237_R3609
56.3
RHH5266_R3638
52.4
RHH5209_R3580
45.2
Terminal effector memory CD4 T-cell nTPM: 39.5
Samples: 2
Max nTPM: 51.6
Min nTPM: 27.3
RHH5243_R3615
51.6
RHH5272_R3644
27.3
Terminal effector memory CD8 T-cell nTPM: 58.4
Samples: 4
Max nTPM: 82.5
Min nTPM: 37.9
RHH5232_R3604
37.9
RHH5204_R3575
82.5
RHH5261_R3633
52.4
RHH5296_R3662
60.9
Vd2 gdTCR nTPM: 72.4
Samples: 4
Max nTPM: 123.6
Min nTPM: 48.5
RHH5234_R3606
48.5
RHH5206_R3577
123.6
RHH5263_R3635
62.0
RHH5298_R3664
55.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
