HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:4.6 nTPM
HPA Brain:13.7 nTPM
GTEx:4.6 nTPM
FANTOM5:26.2 Scaled Tags Per Million
Pig:9.1 nTPM
Mouse:1.7 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044894
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.7
Sample id Sample description nTPM
Hippocampus
nTPM: 12.8
1911 Female, age 85, right hemisphere 14.0
1855 Male, age 76, left hemisphere 13.9
2621 Female, age 67, right hemisphere 13.4
2148 Female, age 91, left hemisphere 13.0
2529 Female, age 94, left hemisphere 11.7
1898 Male, age 80, left hemisphere 10.8
Dentate gyrus
nTPM: 12.2
2246 Female, age 85, both hemispheres 14.1
2010 Male, age 76, both hemispheres 12.5
1927 Female, age 91, both hemispheres 12.3
2531 Female, age 67, both hemispheres 12.3
2528 Male, age 74, both hemispheres 12.2
2530 Female, age 94, left hemisphere 10.1
Entorhinal gyrus
nTPM: 12.3
2613 Female, age 94, left hemisphere 12.8
1787 Male, age 76, left hemisphere 12.6
2686 Male, age 75, right hemisphere 12.6
1938 Female, age 85, left hemisphere 12.3
2764 Male, age 80, right hemisphere 12.2
2117 Female, age 91, right hemisphere 11.5
Hippocampus, CA1
nTPM: 13.0
2045 Male, age 76, both hemispheres 15.4
1873 Female, age 85, both hemispheres 13.5
2527 Male, age 74, both hemispheres 13.1
2082 Female, age 91, right hemisphere 11.7
2749 Male, age 80, left hemisphere 11.5
Hippocampus, CA2
nTPM: 12.6
1892 Male, age 76, both hemispheres 14.7
1963 Male, age 80, left hemisphere 13.8
1940 Female, age 85, left hemisphere 12.8
2113 Female, age 91, right hemisphere 12.0
2249 Male, age 74, both hemispheres 11.3
2437 Female, age 94, left hemisphere 11.0
Hippocampus, CA3
nTPM: 12.2
2620 Female, age 94, left hemisphere 13.3
1891 Female, age 85, both hemispheres 13.2
2436 Male, age 74, both hemispheres 12.6
2137 Male, age 80, left hemisphere 11.9
1867 Male, age 76, both hemispheres 11.2
2861 Female, age 67, both hemispheres 11.2
Parahippocampal cortex
nTPM: 13.7
1933 Female, age 85, both hemispheres 16.3
2693 Female, age 94, both hemispheres 15.6
2622 Female, age 67, right hemisphere 14.6
1850 Male, age 80, both hemispheres 14.2
2250 Female, age 67, right hemisphere 13.3
2018 Male, age 76, both hemispheres 13.0
2245 Female, age 91, both hemispheres 12.9
2532 Female, age 72, left hemisphere 12.9
2692 Male, age 74, both hemispheres 12.5
1990 Female, age 91, right hemisphere 12.0
Perirhinal gyrus
nTPM: 12.9
2521 Female, age 94, right hemisphere 14.1
2848 Male, age 76, right hemisphere 13.6
1847 Female, age 91, left hemisphere 13.1
1841 Female, age 85, right hemisphere 12.2
1794 Male, age 80, right hemisphere 11.6
Subiculum
nTPM: 12.9
2438 Female, age 94, left hemisphere 14.6
2729 Female, age 91, right hemisphere 13.4
1977 Female, age 85, both hemispheres 13.3
1901 Male, age 80, both hemispheres 13.1
2619 Male, age 74, both hemispheres 11.6
2042 Male, age 76, both hemispheres 11.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.6
Samples: 197

Max nTPM: 10.5
Min nTPM: 2.2
Std nTPM: 1.1
Median nTPM: 4.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 10.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 7.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 7.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 6.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 6.8
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 6.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 6.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 6.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 6.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 6.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 6.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.2
FF:10169-103B7 60 years, female 28.0
FF:10153-102I9 76 years, female 24.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.1
Pig sample Sample description nTPM
Subiculum
nTPM: 9.2
Samples: 4

Max nTPM: 9.6
Min nTPM: 8.2
Sample A Female 9.4
Sample B Female 9.6
Sample C Male 8.2
Sample D Male 9.4
Dorsal hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 10.0
Min nTPM: 8.7
Sample A Female 8.9
Sample B Female 8.7
Sample C Male 8.8
Sample D Male 10.0
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.6
Sample A Female 8.3
Sample B Female 8.7
Sample C Male 8.5
Sample D Male 7.6
Ventral hippocampus
nTPM: 8.4
Samples: 4

Max nTPM: 9.9
Min nTPM: 6.0
Sample A Female 9.5
Sample B Female 9.9
Sample C Male 6.0
Sample D Male 8.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.8
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.1
Sample A Male 1.6
Sample B Male 1.9
Sample C Female 2.4
Sample D Female 1.1
Hippocampal formation
nTPM: 1.4
Samples: 4

Max nTPM: 1.9
Min nTPM: 1.1
Sample A Male 1.4
Sample B Male 1.1
Sample C Female 1.9
Sample D Female 1.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68162226 Antisense, RP_041122_02_A02, Mouse strain C57BL/6J (56 days, male) 0.3
70218504 Antisense, RP_050519_04_D07, Mouse strain C57BL/6J (56 days, male) 0.3

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