HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:29.8 nTPM
HPA Brain:15.3 nTPM
GTEx:29.8 nTPM
FANTOM5:25.8 Scaled Tags Per Million
Pig:30.8 nTPM
Mouse:31.0 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.3
Sample id Sample description nTPM
Hippocampus
nTPM: 15.1
2529 Female, age 94, left hemisphere 17.0
1898 Male, age 80, left hemisphere 16.2
1911 Female, age 85, right hemisphere 15.5
1855 Male, age 76, left hemisphere 15.3
2148 Female, age 91, left hemisphere 14.4
2621 Female, age 67, right hemisphere 12.1
Dentate gyrus
nTPM: 14.8
2528 Male, age 74, both hemispheres 20.0
2010 Male, age 76, both hemispheres 16.0
1927 Female, age 91, both hemispheres 15.0
2246 Female, age 85, both hemispheres 13.7
2530 Female, age 94, left hemisphere 12.0
2531 Female, age 67, both hemispheres 12.0
Entorhinal gyrus
nTPM: 14.2
1938 Female, age 85, left hemisphere 16.9
1787 Male, age 76, left hemisphere 15.9
2117 Female, age 91, right hemisphere 15.8
2764 Male, age 80, right hemisphere 13.3
2686 Male, age 75, right hemisphere 12.0
2613 Female, age 94, left hemisphere 11.3
Hippocampus, CA1
nTPM: 14.9
1873 Female, age 85, both hemispheres 17.3
2045 Male, age 76, both hemispheres 16.6
2082 Female, age 91, right hemisphere 13.6
2527 Male, age 74, both hemispheres 13.6
2749 Male, age 80, left hemisphere 13.5
Hippocampus, CA2
nTPM: 14.6
1892 Male, age 76, both hemispheres 17.9
2249 Male, age 74, both hemispheres 15.3
2437 Female, age 94, left hemisphere 15.0
1963 Male, age 80, left hemisphere 13.3
1940 Female, age 85, left hemisphere 13.2
2113 Female, age 91, right hemisphere 13.0
Hippocampus, CA3
nTPM: 15.3
1891 Female, age 85, both hemispheres 18.2
2436 Male, age 74, both hemispheres 18.1
1867 Male, age 76, both hemispheres 16.0
2620 Female, age 94, left hemisphere 15.0
2137 Male, age 80, left hemisphere 13.0
2861 Female, age 67, both hemispheres 11.3
Parahippocampal cortex
nTPM: 14.5
2018 Male, age 76, both hemispheres 17.3
1933 Female, age 85, both hemispheres 16.3
2250 Female, age 67, right hemisphere 15.6
2692 Male, age 74, both hemispheres 15.6
1850 Male, age 80, both hemispheres 15.3
2693 Female, age 94, both hemispheres 14.6
1990 Female, age 91, right hemisphere 13.5
2245 Female, age 91, both hemispheres 12.7
2532 Female, age 72, left hemisphere 12.4
2622 Female, age 67, right hemisphere 11.4
Perirhinal gyrus
nTPM: 15.0
1841 Female, age 85, right hemisphere 16.4
1847 Female, age 91, left hemisphere 15.9
2848 Male, age 76, right hemisphere 14.6
1794 Male, age 80, right hemisphere 14.5
2521 Female, age 94, right hemisphere 13.6
Subiculum
nTPM: 15.0
2042 Male, age 76, both hemispheres 17.6
2729 Female, age 91, right hemisphere 15.3
1977 Female, age 85, both hemispheres 15.1
1901 Male, age 80, both hemispheres 14.2
2619 Male, age 74, both hemispheres 14.1
2438 Female, age 94, left hemisphere 13.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.8
Samples: 197

Max nTPM: 61.8
Min nTPM: 16.7
Std nTPM: 6.1
Median nTPM: 28.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 61.8
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 43.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 41.7
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 41.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 41.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 41.5
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 41.4
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 40.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 40.5
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 40.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 40.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.8
FF:10153-102I9 76 years, female 35.1
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.8
Pig sample Sample description nTPM
Subiculum
nTPM: 25.2
Samples: 4

Max nTPM: 28.5
Min nTPM: 23.3
Sample A Female 25.1
Sample B Female 23.7
Sample C Male 23.3
Sample D Male 28.5
Dorsal hippocampus
nTPM: 30.8
Samples: 4

Max nTPM: 36.3
Min nTPM: 26.9
Sample A Female 36.3
Sample B Female 28.0
Sample C Male 31.8
Sample D Male 26.9
Entorhinal cortex
nTPM: 24.7
Samples: 4

Max nTPM: 28.2
Min nTPM: 20.2
Sample A Female 26.2
Sample B Female 28.2
Sample C Male 24.1
Sample D Male 20.2
Ventral hippocampus
nTPM: 27.2
Samples: 4

Max nTPM: 31.6
Min nTPM: 24.2
Sample A Female 31.6
Sample B Female 24.2
Sample C Male 27.1
Sample D Male 26.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.6
Samples: 4

Max nTPM: 29.5
Min nTPM: 21.1
Sample A Male 27.9
Sample B Male 27.7
Sample C Female 29.5
Sample D Female 21.1
Hippocampal formation
nTPM: 31.0
Samples: 4

Max nTPM: 31.6
Min nTPM: 30.3
Sample A Male 31.6
Sample B Male 31.0
Sample C Female 30.3
Sample D Female 31.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
68301168 Antisense, RP_041129_02_G02, Mouse strain C57BL/6J (56 days, male) 1.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org