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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
173.8
nTPM
Monaco:
48.3
nTPM
Schmiedel:
52.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
173.8
HPA sample
nTPM
gdT-cell nTPM: 173.8
Samples: 6
Max nTPM: 257.5
Min nTPM: 102.6
P10809_1007
121.0
P10809_1022
186.1
P10809_1041
257.5
P10809_1060
102.6
P10809_1077
185.0
P10809_1098
190.5
MAIT T-cell nTPM: 130.6
Samples: 6
Max nTPM: 202.5
Min nTPM: 67.0
P10809_1006
67.0
P10809_1024
110.9
P10809_1043
177.6
P10809_1062
125.9
P10809_1083
99.5
P10809_1097
202.5
Memory CD4 T-cell nTPM: 109.6
Samples: 6
Max nTPM: 131.2
Min nTPM: 63.5
P10809_1014
63.5
P10809_1026
131.2
P10809_1045
117.5
P10809_1064
125.1
P10809_1086
120.0
P10809_1113
100.3
Memory CD8 T-cell nTPM: 156.8
Samples: 5
Max nTPM: 210.4
Min nTPM: 85.4
P10809_1012
85.4
P10809_1027
158.7
P10809_1046
210.4
P10809_1065
161.9
P10809_1111
167.6
Naive CD4 T-cell nTPM: 86.8
Samples: 6
Max nTPM: 177.8
Min nTPM: 34.0
P10809_1015
34.0
P10809_1030
69.3
P10809_1049
177.8
P10809_1068
68.8
P10809_1085
94.1
P10809_1112
77.0
Naive CD8 T-cell nTPM: 103.0
Samples: 6
Max nTPM: 145.4
Min nTPM: 45.4
P10809_1016
45.4
P10809_1031
93.1
P10809_1050
114.1
P10809_1069
145.4
P10809_1087
122.3
P10809_1110
97.8
T-reg nTPM: 127.3
Samples: 6
Max nTPM: 257.5
Min nTPM: 53.9
P10809_1018
53.9
P10809_1037
82.1
P10809_1056
257.5
P10809_1075
138.4
P10809_1094
114.5
P10809_1106
117.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
48.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 19.1
Samples: 4
Max nTPM: 23.0
Min nTPM: 14.8
RHH5202_R3573
19.7
RHH5230_R3602
18.7
RHH5259_R3631
14.8
RHH5288_R3660
23.0
Effector memory CD8 T-cell nTPM: 19.3
Samples: 4
Max nTPM: 23.4
Min nTPM: 13.3
RHH5203_R3574
21.2
RHH5231_R3603
23.4
RHH5260_R3632
19.3
RHH5289_R3661
13.3
MAIT T-cell nTPM: 28.5
Samples: 4
Max nTPM: 36.1
Min nTPM: 13.6
RHH5233_R3605
13.6
RHH5205_R3576
33.5
RHH5262_R3634
36.1
RHH5297_R3663
30.7
Memory CD4 T-cell TFH nTPM: 25.4
Samples: 4
Max nTPM: 41.9
Min nTPM: 9.6
RHH5300_R3666
25.5
RHH5236_R3608
41.9
RHH5265_R3637
9.6
RHH5208_R3579
24.6
Memory CD4 T-cell Th1 nTPM: 25.8
Samples: 4
Max nTPM: 37.4
Min nTPM: 20.8
RHH5210_R3581
23.5
RHH5302_R3668
37.4
RHH5238_R3610
21.6
RHH5267_R3639
20.8
Memory CD4 T-cell Th1/Th17 nTPM: 25.4
Samples: 4
Max nTPM: 37.7
Min nTPM: 12.5
RHH5303_R3669
26.4
RHH5211_R3582
37.7
RHH5239_R3611
12.5
RHH5268_R3640
24.8
Memory CD4 T-cell Th17 nTPM: 17.8
Samples: 4
Max nTPM: 27.7
Min nTPM: 13.5
RHH5304_R3670
16.1
RHH5212_R3583
27.7
RHH5240_R3612
13.9
RHH5269_R3641
13.5
Memory CD4 T-cell Th2 nTPM: 24.8
Samples: 4
Max nTPM: 30.2
Min nTPM: 20.2
RHH5305_R3671
25.6
RHH5213_R3584
30.2
RHH5241_R3613
20.2
RHH5270_R3642
23.1
Naive CD4 T-cell nTPM: 20.6
Samples: 4
Max nTPM: 38.9
Min nTPM: 9.8
RHH5306_R3672
18.0
RHH5214_R3585
38.9
RHH5242_R3614
9.8
RHH5271_R3643
15.6
Naive CD8 T-cell nTPM: 11.7
Samples: 4
Max nTPM: 14.5
Min nTPM: 9.0
RHH5201_R3572
10.0
RHH5229_R3601
14.5
RHH5258_R3630
9.0
RHH5287_R3659
13.4
Non-Vd2 gdTCR nTPM: 39.4
Samples: 4
Max nTPM: 57.6
Min nTPM: 30.9
RHH5235_R3607
30.9
RHH5264_R3636
34.4
RHH5207_R3578
34.8
RHH5299_R3665
57.6
T-reg nTPM: 24.6
Samples: 4
Max nTPM: 33.3
Min nTPM: 12.7
RHH5301_R3667
29.9
RHH5237_R3609
33.3
RHH5266_R3638
12.7
RHH5209_R3580
22.5
Terminal effector memory CD4 T-cell nTPM: 21.9
Samples: 2
Max nTPM: 22.2
Min nTPM: 21.6
RHH5243_R3615
22.2
RHH5272_R3644
21.6
Terminal effector memory CD8 T-cell nTPM: 48.3
Samples: 4
Max nTPM: 97.8
Min nTPM: 23.1
RHH5232_R3604
23.1
RHH5204_R3575
97.8
RHH5261_R3633
36.4
RHH5296_R3662
35.9
Vd2 gdTCR nTPM: 43.4
Samples: 4
Max nTPM: 61.4
Min nTPM: 25.1
RHH5234_R3606
25.1
RHH5206_R3577
61.4
RHH5263_R3635
32.0
RHH5298_R3664
55.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
