HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:351.5 nTPM
HPA Brain:911.9 nTPM
GTEx:351.5 nTPM
FANTOM5:879.0 Scaled Tags Per Million
Pig:824.8 nTPM
Mouse:1439.9 nTPM
Allen mouse:15.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB025918
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 911.9
Sample id Sample description nTPM
Hippocampus
nTPM: 512.5
1898 Male, age 80, left hemisphere 848.3
2621 Female, age 67, right hemisphere 626.3
1855 Male, age 76, left hemisphere 582.1
2148 Female, age 91, left hemisphere 479.4
1911 Female, age 85, right hemisphere 283.0
2529 Female, age 94, left hemisphere 255.9
Dentate gyrus
nTPM: 629.9
1927 Female, age 91, both hemispheres 777.3
2530 Female, age 94, left hemisphere 729.3
2010 Male, age 76, both hemispheres 684.7
2246 Female, age 85, both hemispheres 619.2
2531 Female, age 67, both hemispheres 508.6
2528 Male, age 74, both hemispheres 460.4
Entorhinal gyrus
nTPM: 490.8
2764 Male, age 80, right hemisphere 613.6
2613 Female, age 94, left hemisphere 595.2
1938 Female, age 85, left hemisphere 578.3
1787 Male, age 76, left hemisphere 561.5
2686 Male, age 75, right hemisphere 337.6
2117 Female, age 91, right hemisphere 258.3
Hippocampus, CA1
nTPM: 645.0
2749 Male, age 80, left hemisphere 1006.4
1873 Female, age 85, both hemispheres 750.7
2082 Female, age 91, right hemisphere 503.5
2045 Male, age 76, both hemispheres 494.4
2527 Male, age 74, both hemispheres 469.8
Hippocampus, CA2
nTPM: 566.8
1963 Male, age 80, left hemisphere 879.0
1892 Male, age 76, both hemispheres 694.2
1940 Female, age 85, left hemisphere 564.9
2437 Female, age 94, left hemisphere 450.2
2113 Female, age 91, right hemisphere 425.9
2249 Male, age 74, both hemispheres 386.4
Hippocampus, CA3
nTPM: 462.4
2137 Male, age 80, left hemisphere 577.5
2861 Female, age 67, both hemispheres 541.8
2620 Female, age 94, left hemisphere 529.5
2436 Male, age 74, both hemispheres 395.3
1867 Male, age 76, both hemispheres 384.7
1891 Female, age 85, both hemispheres 345.6
Parahippocampal cortex
nTPM: 564.9
1850 Male, age 80, both hemispheres 802.2
2245 Female, age 91, both hemispheres 675.8
2250 Female, age 67, right hemisphere 667.4
1933 Female, age 85, both hemispheres 657.3
2693 Female, age 94, both hemispheres 581.3
1990 Female, age 91, right hemisphere 552.2
2532 Female, age 72, left hemisphere 534.1
2622 Female, age 67, right hemisphere 454.1
2018 Male, age 76, both hemispheres 444.5
2692 Male, age 74, both hemispheres 279.7
Perirhinal gyrus
nTPM: 911.9
1847 Female, age 91, left hemisphere 1106.0
2521 Female, age 94, right hemisphere 1101.3
1794 Male, age 80, right hemisphere 986.2
1841 Female, age 85, right hemisphere 785.0
2848 Male, age 76, right hemisphere 581.2
Subiculum
nTPM: 367.3
1977 Female, age 85, both hemispheres 546.8
1901 Male, age 80, both hemispheres 397.8
2729 Female, age 91, right hemisphere 353.9
2438 Female, age 94, left hemisphere 325.4
2619 Male, age 74, both hemispheres 305.0
2042 Male, age 76, both hemispheres 274.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 351.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 351.5
Samples: 197

Max nTPM: 1699.1
Min nTPM: 47.8
Std nTPM: 284.7
Median nTPM: 252.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 1699.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 1210.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 1191.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 1189.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 1137.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 1024.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 973.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 972.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 966.1
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 940.3
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 928.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 879.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 879.0
FF:10169-103B7 60 years, female 1335.6
FF:10153-102I9 76 years, female 422.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 824.8
Pig sample Sample description nTPM
Subiculum
nTPM: 691.1
Samples: 4

Max nTPM: 952.7
Min nTPM: 589.8
Sample A Female 952.7
Sample B Female 610.0
Sample C Male 611.8
Sample D Male 589.8
Dorsal hippocampus
nTPM: 824.8
Samples: 4

Max nTPM: 1048.7
Min nTPM: 566.7
Sample A Female 1048.7
Sample B Female 929.3
Sample C Male 566.7
Sample D Male 754.5
Entorhinal cortex
nTPM: 759.1
Samples: 4

Max nTPM: 864.5
Min nTPM: 662.8
Sample A Female 864.5
Sample B Female 816.6
Sample C Male 692.3
Sample D Male 662.8
Ventral hippocampus
nTPM: 686.1
Samples: 4

Max nTPM: 818.3
Min nTPM: 498.6
Sample A Female 720.6
Sample B Female 498.6
Sample C Male 706.7
Sample D Male 818.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1439.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1178.5
Samples: 4

Max nTPM: 1241.6
Min nTPM: 1104.8
Sample A Male 1104.8
Sample B Male 1241.6
Sample C Female 1169.8
Sample D Female 1197.8
Hippocampal formation
nTPM: 1439.9
Samples: 4

Max nTPM: 1594.1
Min nTPM: 1268.0
Sample A Male 1468.8
Sample B Male 1428.7
Sample C Female 1594.1
Sample D Female 1268.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.0
1127 Antisense, RP_Baylor_103128, Mouse strain C57BL/6J (56 days, male) 15.0
1128 Antisense, RP_Baylor_103128, Mouse strain C57BL/6J (56 days, male) 14.3

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