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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
438.0
nTPM
FANTOM5:
591.0
Scaled Tags Per Million
Pig:
736.9
nTPM
Allen mouse:
12.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
438.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 213.9
1984
Male, age 76, both hemispheres
239.9
2188
Female, age 91, both hemispheres
215.3
2301
Female, age 85, both hemispheres
215.3
2090
Male, age 80, both hemispheres
185.2
Dorsal cochlear nucleus nTPM: 208.8
2187
Female, age 91, both hemispheres
265.2
2802
Male, age 74, right hemisphere
217.4
2058
Male, age 76, both hemispheres
216.9
2370
Male, age 61, both hemispheres
184.0
2378
Male, age 80, both hemispheres
160.6
Dorsal tegmental nucleus nTPM: 231.4
2083
Male, age 80, both hemispheres
244.1
2326
Male, age 74, both hemispheres
234.4
2358
Male, age 61, both hemispheres
231.4
1936
Male, age 76, left hemisphere
215.7
Dorsolateral tegmental area nTPM: 230.7
2751
Female, age 85, both hemispheres
258.3
2360
Male, age 74, both hemispheres
252.0
2141
Male, age 76, both hemispheres
246.8
2654
Male, age 80, both hemispheres
240.6
2337
Male, age 61, both hemispheres
155.7
Kolliker-Fuse nucleus nTPM: 276.2
2163
Male, age 80, both hemispheres
374.4
2793
Female, age 91, left hemisphere
249.2
2315
Male, age 76, right hemisphere
205.0
Lateral lemniscal nuclei nTPM: 370.5
2169
Male, age 76, both hemispheres
491.4
2036
Male, age 80, both hemispheres
390.4
2453
Male, age 74, right hemisphere
377.1
2746
Female, age 85, left hemisphere
375.4
2320
Female, age 91, left hemisphere
218.2
Lateral parabrachial nucleus nTPM: 269.7
2139
Female, age 85, right hemisphere
423.2
2013
Male, age 80, both hemispheres
282.0
2790
Male, age 61, both hemispheres
219.2
2792
Male, age 76, both hemispheres
154.5
Lateral vestibular nucleus nTPM: 285.8
2184
Male, age 76, both hemispheres
366.5
2311
Male, age 80, both hemispheres
205.0
Locus coeruleus nTPM: 417.7
2720
Male, age 74, both hemispheres
539.4
2123
Female, age 91, both hemispheres
529.9
2014
Male, age 55, unknown
441.9
2788
Male, age 74, unknown
421.4
1980
Male, age 76, both hemispheres
351.4
2317
Female, age 72, unknown
327.8
2162
Male, age 80, both hemispheres
312.4
Medial parabrachial nucleus nTPM: 268.4
2854
Male, age 80, both hemispheres
329.1
2170
Female, age 91, both hemispheres
300.2
2156
Male, age 61, both hemispheres
258.8
2786
Male, age 76, both hemispheres
248.1
2463
Female, age 85, right hemisphere
205.6
Medial periolivary nuclei nTPM: 337.3
2171
Female, age 85, both hemispheres
498.7
2063
Male, age 76, both hemispheres
451.5
2791
Male, age 74, right hemisphere
336.7
2081
Male, age 80, both hemispheres
210.8
2458
Female, age 91, both hemispheres
188.7
Motor facial nucleus nTPM: 339.4
2062
Male, age 76, both hemispheres
490.0
2365
Male, age 74, right hemisphere
428.2
2697
Female, age 85, both hemispheres
344.6
2327
Male, age 80, both hemispheres
318.5
2126
Male, age 61, both hemispheres
246.2
2795
Female, age 91, both hemispheres
208.9
Motor trigeminal nucleus nTPM: 260.0
2079
Male, age 80, both hemispheres
340.7
2560
Male, age 74, both hemispheres
278.1
2309
Male, age 76, both hemispheres
239.6
2335
Male, age 61, both hemispheres
239.4
2321
Female, age 91, both hemispheres
202.4
Nuclei of the trapezoid body nTPM: 404.8
2159
Male, age 61, both hemispheres
600.5
2735
Female, age 85, both hemispheres
503.3
1983
Male, age 76, both hemispheres
440.1
2166
Male, age 80, both hemispheres
294.2
2368
Female, age 91, both hemispheres
186.0
Nucleus raphe magnus nTPM: 438.0
2160
Male, age 61, both hemispheres
706.5
2455
Male, age 74, both hemispheres
545.7
2172
Female, age 85, both hemispheres
524.6
2051
Male, age 76, both hemispheres
316.6
2328
Male, age 80, both hemispheres
314.8
2459
Female, age 91, both hemispheres
219.8
Paramedian reticular nucleus nTPM: 338.4
2050
Female, age 85, both hemispheres
453.8
2313
Male, age 61, both hemispheres
354.4
2057
Male, age 80, both hemispheres
297.4
2052
Male, age 76, both hemispheres
248.1
Pedunculopontine tegmental nucleus nTPM: 290.1
1921
Female, age 85, both hemispheres
312.1
2334
Male, age 80, both hemispheres
292.1
2338
Male, age 61, both hemispheres
266.0
Pontine nuclei nTPM: 416.6
2727
Male, age 61, right hemisphere
626.3
2787
Female, age 85, both hemispheres
544.4
1863
Male, age 55, unknown
537.4
2109
Female, age 72, unknown
419.9
1968
Male, age 76, left hemisphere
380.9
2454
Male, age 74, left hemisphere
336.0
2115
Male, age 80, left hemisphere
246.5
2319
Female, age 91, both hemispheres
241.6
Pontine raphe nucleus nTPM: 387.4
2122
Female, age 85, midline
450.2
2853
Male, age 76, midline
324.5
Posteroventral cochlear nucleus nTPM: 217.3
2752
Female, age 85, both hemispheres
318.5
2070
Male, age 76, both hemispheres
279.4
2371
Male, age 61, both hemispheres
179.4
2341
Male, age 80, both hemispheres
168.7
2135
Female, age 91, both hemispheres
140.4
Principal sensory trigeminal nucleus nTPM: 392.8
2158
Male, age 61, both hemispheres
616.4
2008
Male, age 80, left hemisphere
422.3
2324
Male, age 76, both hemispheres
307.8
2367
Female, age 91, left hemisphere
224.9
Reticular pontine nucleus, caudal nTPM: 281.3
2092
Male, age 76, both hemispheres
357.9
2332
Male, age 80, right hemisphere
343.7
2559
Male, age 74, both hemispheres
233.2
2457
Female, age 91, both hemispheres
190.2
Reticular pontine nucleus, oral nTPM: 299.4
2012
Female, age 85, both hemispheres
408.3
2361
Male, age 74, both hemispheres
368.9
1939
Male, age 80, both hemispheres
266.9
2167
Male, age 76, both hemispheres
263.4
2366
Female, age 91, both hemispheres
189.4
Reticulotegmental nucleus nTPM: 294.7
2325
Male, age 76, both hemispheres
389.6
2452
Male, age 74, both hemispheres
290.3
2322
Female, age 91, both hemispheres
250.8
2333
Male, age 80, both hemispheres
248.2
Spinal trigeminal nucleus, oral nTPM: 306.7
2737
Female, age 85, both hemispheres
330.8
2164
Male, age 80, both hemispheres
324.5
1978
Male, age 76, both hemispheres
264.7
Subcoeruleus area nTPM: 304.4
2323
Female, age 91, left hemisphere
398.9
1958
Male, age 80, both hemispheres
348.9
2089
Male, age 76, left hemisphere
326.0
2451
Male, age 74, both hemispheres
251.2
2369
Female, age 85, left hemisphere
196.9
Superior olive nTPM: 361.8
1875
Female, age 85, both hemispheres
503.2
2364
Male, age 74, right hemisphere
419.4
2020
Male, age 76, both hemispheres
353.1
2329
Male, age 80, right hemisphere
284.4
2561
Female, age 91, both hemispheres
248.8
Ventral periolivary nuclei nTPM: 376.1
2130
Female, age 85, both hemispheres
472.8
2165
Male, age 80, both hemispheres
399.0
2023
Male, age 76, both hemispheres
351.2
2794
Female, age 91, left hemisphere
281.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 299.5
2449
Male, age 74, both hemispheres
438.1
2840
Female, age 85, both hemispheres
351.9
1959
Male, age 76, both hemispheres
347.8
2161
Male, age 80, both hemispheres
271.1
2359
Male, age 61, both hemispheres
232.8
2456
Female, age 91, both hemispheres
155.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
736.9
Pig sample
Sample description
nTPM
Pons nTPM: 736.9
Samples: 4
Max nTPM: 1199.0
Min nTPM: 468.6
Sample A
Female
1199.0
Sample B
Female
468.6
Sample C
Male
585.1
Sample D
Male
694.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
