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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
19.6
nTPM
Monaco:
28.2
nTPM
Schmiedel:
126.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.6
HPA sample
nTPM
gdT-cell nTPM: 7.6
Samples: 6
Max nTPM: 13.3
Min nTPM: 3.6
P10809_1007
7.7
P10809_1022
5.6
P10809_1041
13.3
P10809_1060
3.6
P10809_1077
9.7
P10809_1098
5.7
MAIT T-cell nTPM: 11.1
Samples: 6
Max nTPM: 19.2
Min nTPM: 5.5
P10809_1006
12.0
P10809_1024
5.5
P10809_1043
19.2
P10809_1062
7.8
P10809_1083
13.8
P10809_1097
8.5
Memory CD4 T-cell nTPM: 9.4
Samples: 6
Max nTPM: 12.0
Min nTPM: 6.6
P10809_1014
12.0
P10809_1026
11.6
P10809_1045
9.6
P10809_1064
9.6
P10809_1086
7.1
P10809_1113
6.6
Memory CD8 T-cell nTPM: 10.8
Samples: 5
Max nTPM: 12.3
Min nTPM: 8.6
P10809_1012
8.6
P10809_1027
11.4
P10809_1046
12.3
P10809_1065
10.8
P10809_1111
11.1
Naive CD4 T-cell nTPM: 3.7
Samples: 6
Max nTPM: 8.3
Min nTPM: 1.8
P10809_1015
3.6
P10809_1030
3.3
P10809_1049
8.3
P10809_1068
2.3
P10809_1085
1.8
P10809_1112
2.8
Naive CD8 T-cell nTPM: 4.9
Samples: 6
Max nTPM: 6.5
Min nTPM: 3.6
P10809_1016
3.8
P10809_1031
6.5
P10809_1050
3.9
P10809_1069
3.6
P10809_1087
5.4
P10809_1110
6.1
T-reg nTPM: 19.6
Samples: 6
Max nTPM: 31.6
Min nTPM: 10.0
P10809_1018
13.2
P10809_1037
29.2
P10809_1056
31.6
P10809_1075
13.3
P10809_1094
10.0
P10809_1106
20.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
28.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 12.9
Samples: 4
Max nTPM: 37.9
Min nTPM: 1.0
RHH5202_R3573
3.0
RHH5230_R3602
37.9
RHH5259_R3631
9.5
RHH5288_R3660
1.0
Effector memory CD8 T-cell nTPM: 15.9
Samples: 4
Max nTPM: 23.4
Min nTPM: 1.5
RHH5203_R3574
1.5
RHH5231_R3603
18.8
RHH5260_R3632
23.4
RHH5289_R3661
19.7
MAIT T-cell nTPM: 28.2
Samples: 4
Max nTPM: 52.1
Min nTPM: 12.2
RHH5233_R3605
12.2
RHH5205_R3576
22.6
RHH5262_R3634
52.1
RHH5297_R3663
25.8
Memory CD4 T-cell TFH nTPM: 14.1
Samples: 4
Max nTPM: 27.3
Min nTPM: 4.2
RHH5300_R3666
27.3
RHH5236_R3608
18.8
RHH5265_R3637
5.9
RHH5208_R3579
4.2
Memory CD4 T-cell Th1 nTPM: 10.1
Samples: 4
Max nTPM: 17.1
Min nTPM: 4.4
RHH5210_R3581
6.6
RHH5302_R3668
4.4
RHH5238_R3610
12.2
RHH5267_R3639
17.1
Memory CD4 T-cell Th1/Th17 nTPM: 20.4
Samples: 4
Max nTPM: 35.5
Min nTPM: 7.9
RHH5303_R3669
9.2
RHH5211_R3582
28.8
RHH5239_R3611
7.9
RHH5268_R3640
35.5
Memory CD4 T-cell Th17 nTPM: 22.5
Samples: 4
Max nTPM: 32.3
Min nTPM: 9.0
RHH5304_R3670
16.3
RHH5212_R3583
32.2
RHH5240_R3612
9.0
RHH5269_R3641
32.3
Memory CD4 T-cell Th2 nTPM: 14.8
Samples: 4
Max nTPM: 25.1
Min nTPM: 5.5
RHH5305_R3671
11.7
RHH5213_R3584
16.9
RHH5241_R3613
5.5
RHH5270_R3642
25.1
Naive CD4 T-cell nTPM: 2.8
Samples: 4
Max nTPM: 5.5
Min nTPM: 1.5
RHH5306_R3672
5.5
RHH5214_R3585
1.5
RHH5242_R3614
2.0
RHH5271_R3643
2.1
Naive CD8 T-cell nTPM: 7.1
Samples: 4
Max nTPM: 11.9
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
8.9
RHH5258_R3630
11.9
RHH5287_R3659
7.4
Non-Vd2 gdTCR nTPM: 15.0
Samples: 4
Max nTPM: 33.9
Min nTPM: 1.6
RHH5235_R3607
22.7
RHH5264_R3636
1.8
RHH5207_R3578
1.6
RHH5299_R3665
33.9
T-reg nTPM: 19.4
Samples: 4
Max nTPM: 28.0
Min nTPM: 11.5
RHH5301_R3667
20.9
RHH5237_R3609
17.0
RHH5266_R3638
28.0
RHH5209_R3580
11.5
Terminal effector memory CD4 T-cell nTPM: 15.8
Samples: 2
Max nTPM: 23.9
Min nTPM: 7.7
RHH5243_R3615
23.9
RHH5272_R3644
7.7
Terminal effector memory CD8 T-cell nTPM: 16.1
Samples: 4
Max nTPM: 33.0
Min nTPM: 1.5
RHH5232_R3604
1.5
RHH5204_R3575
21.7
RHH5261_R3633
33.0
RHH5296_R3662
8.2
Vd2 gdTCR nTPM: 13.0
Samples: 4
Max nTPM: 21.1
Min nTPM: 9.2
RHH5234_R3606
9.2
RHH5206_R3577
12.6
RHH5263_R3635
9.2
RHH5298_R3664
21.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
