HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:261.1 nTPM
HPA Brain:136.5 nTPM
GTEx:261.1 nTPM
FANTOM5:244.8 Scaled Tags Per Million
Pig:106.7 nTPM
Mouse:96.1 nTPM
Allen mouse:8.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB011596
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 136.5
Sample id Sample description nTPM
Hippocampus
nTPM: 136.5
2529 Female, age 94, left hemisphere 151.2
2621 Female, age 67, right hemisphere 143.6
1898 Male, age 80, left hemisphere 141.0
1855 Male, age 76, left hemisphere 138.1
2148 Female, age 91, left hemisphere 125.6
1911 Female, age 85, right hemisphere 119.3
Dentate gyrus
nTPM: 126.8
2010 Male, age 76, both hemispheres 150.2
2530 Female, age 94, left hemisphere 142.7
2531 Female, age 67, both hemispheres 121.7
2246 Female, age 85, both hemispheres 116.3
2528 Male, age 74, both hemispheres 116.0
1927 Female, age 91, both hemispheres 114.0
Entorhinal gyrus
nTPM: 119.7
2117 Female, age 91, right hemisphere 128.9
1787 Male, age 76, left hemisphere 125.5
2764 Male, age 80, right hemisphere 125.1
2686 Male, age 75, right hemisphere 124.0
1938 Female, age 85, left hemisphere 121.2
2613 Female, age 94, left hemisphere 93.5
Hippocampus, CA1
nTPM: 133.4
2749 Male, age 80, left hemisphere 175.8
1873 Female, age 85, both hemispheres 128.7
2045 Male, age 76, both hemispheres 127.8
2527 Male, age 74, both hemispheres 124.7
2082 Female, age 91, right hemisphere 110.2
Hippocampus, CA2
nTPM: 126.3
1963 Male, age 80, left hemisphere 156.5
1892 Male, age 76, both hemispheres 135.5
2437 Female, age 94, left hemisphere 118.5
2249 Male, age 74, both hemispheres 118.4
1940 Female, age 85, left hemisphere 117.7
2113 Female, age 91, right hemisphere 111.3
Hippocampus, CA3
nTPM: 128.7
1867 Male, age 76, both hemispheres 151.7
2137 Male, age 80, left hemisphere 140.6
2861 Female, age 67, both hemispheres 127.1
1891 Female, age 85, both hemispheres 126.5
2436 Male, age 74, both hemispheres 118.2
2620 Female, age 94, left hemisphere 108.1
Parahippocampal cortex
nTPM: 123.3
2018 Male, age 76, both hemispheres 143.4
2532 Female, age 72, left hemisphere 135.6
2692 Male, age 74, both hemispheres 133.6
1990 Female, age 91, right hemisphere 127.2
1850 Male, age 80, both hemispheres 126.0
2245 Female, age 91, both hemispheres 123.6
2250 Female, age 67, right hemisphere 118.1
1933 Female, age 85, both hemispheres 117.4
2622 Female, age 67, right hemisphere 114.6
2693 Female, age 94, both hemispheres 94.0
Perirhinal gyrus
nTPM: 113.9
1847 Female, age 91, left hemisphere 126.3
2521 Female, age 94, right hemisphere 114.5
1794 Male, age 80, right hemisphere 113.4
1841 Female, age 85, right hemisphere 108.4
2848 Male, age 76, right hemisphere 106.8
Subiculum
nTPM: 135.0
2042 Male, age 76, both hemispheres 167.0
1901 Male, age 80, both hemispheres 140.0
2438 Female, age 94, left hemisphere 131.5
1977 Female, age 85, both hemispheres 131.4
2619 Male, age 74, both hemispheres 125.4
2729 Female, age 91, right hemisphere 114.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 261.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 261.1
Samples: 197

Max nTPM: 630.4
Min nTPM: 143.9
Std nTPM: 72.5
Median nTPM: 244.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 630.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 560.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 553.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 495.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 481.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 473.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 469.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 426.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 416.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 391.7
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 389.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 244.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 244.8
FF:10153-102I9 76 years, female 267.4
FF:10169-103B7 60 years, female 222.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 106.7
Pig sample Sample description nTPM
Subiculum
nTPM: 91.6
Samples: 4

Max nTPM: 118.9
Min nTPM: 74.1
Sample A Female 118.9
Sample B Female 74.1
Sample C Male 90.1
Sample D Male 83.4
Dorsal hippocampus
nTPM: 105.6
Samples: 4

Max nTPM: 126.1
Min nTPM: 86.9
Sample A Female 126.1
Sample B Female 89.5
Sample C Male 119.7
Sample D Male 86.9
Entorhinal cortex
nTPM: 91.3
Samples: 4

Max nTPM: 99.1
Min nTPM: 84.0
Sample A Female 95.5
Sample B Female 99.1
Sample C Male 86.6
Sample D Male 84.0
Ventral hippocampus
nTPM: 106.7
Samples: 4

Max nTPM: 137.2
Min nTPM: 70.6
Sample A Female 120.9
Sample B Female 70.6
Sample C Male 137.2
Sample D Male 98.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 96.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 96.1
Samples: 4

Max nTPM: 108.9
Min nTPM: 77.3
Sample A Male 98.7
Sample B Male 108.9
Sample C Female 99.6
Sample D Female 77.3
Hippocampal formation
nTPM: 92.0
Samples: 4

Max nTPM: 105.6
Min nTPM: 81.8
Sample A Male 105.6
Sample B Male 91.4
Sample C Female 81.8
Sample D Female 89.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.9
69288650 Antisense, RP_050407_01_D10, Mouse strain C57BL/6J (56 days, male) 8.9

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