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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
188.6
nTPM
FANTOM5:
359.6
Scaled Tags Per Million
Pig:
132.3
nTPM
Allen mouse:
7.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
188.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 172.0
2301
Female, age 85, both hemispheres
185.5
2188
Female, age 91, both hemispheres
181.0
2090
Male, age 80, both hemispheres
166.9
1984
Male, age 76, both hemispheres
154.7
Dorsal cochlear nucleus nTPM: 172.1
2802
Male, age 74, right hemisphere
194.7
2187
Female, age 91, both hemispheres
183.1
2378
Male, age 80, both hemispheres
171.0
2058
Male, age 76, both hemispheres
165.0
2370
Male, age 61, both hemispheres
146.8
Dorsal tegmental nucleus nTPM: 173.7
2358
Male, age 61, both hemispheres
218.0
2083
Male, age 80, both hemispheres
177.6
2326
Male, age 74, both hemispheres
153.6
1936
Male, age 76, left hemisphere
145.7
Dorsolateral tegmental area nTPM: 157.1
2751
Female, age 85, both hemispheres
211.2
2654
Male, age 80, both hemispheres
169.8
2337
Male, age 61, both hemispheres
146.3
2141
Male, age 76, both hemispheres
138.4
2360
Male, age 74, both hemispheres
120.0
Kolliker-Fuse nucleus nTPM: 188.3
2793
Female, age 91, left hemisphere
200.6
2315
Male, age 76, right hemisphere
199.5
2163
Male, age 80, both hemispheres
164.8
Lateral lemniscal nuclei nTPM: 156.8
2453
Male, age 74, right hemisphere
174.2
2746
Female, age 85, left hemisphere
172.2
2036
Male, age 80, both hemispheres
159.6
2320
Female, age 91, left hemisphere
154.0
2169
Male, age 76, both hemispheres
123.8
Lateral parabrachial nucleus nTPM: 182.0
2792
Male, age 76, both hemispheres
223.2
2790
Male, age 61, both hemispheres
180.8
2013
Male, age 80, both hemispheres
169.4
2139
Female, age 85, right hemisphere
154.8
Lateral vestibular nucleus nTPM: 161.0
2311
Male, age 80, both hemispheres
162.0
2184
Male, age 76, both hemispheres
159.9
Locus coeruleus nTPM: 154.6
1980
Male, age 76, both hemispheres
183.9
2123
Female, age 91, both hemispheres
177.9
2720
Male, age 74, both hemispheres
158.0
2788
Male, age 74, unknown
143.4
2162
Male, age 80, both hemispheres
140.9
2317
Female, age 72, unknown
139.9
2014
Male, age 55, unknown
138.6
Medial parabrachial nucleus nTPM: 188.6
2463
Female, age 85, right hemisphere
213.6
2170
Female, age 91, both hemispheres
205.8
2854
Male, age 80, both hemispheres
192.3
2156
Male, age 61, both hemispheres
169.1
2786
Male, age 76, both hemispheres
162.4
Medial periolivary nuclei nTPM: 153.0
2081
Male, age 80, both hemispheres
176.2
2791
Male, age 74, right hemisphere
157.1
2458
Female, age 91, both hemispheres
157.0
2171
Female, age 85, both hemispheres
147.6
2063
Male, age 76, both hemispheres
126.9
Motor facial nucleus nTPM: 157.5
2697
Female, age 85, both hemispheres
177.2
2365
Male, age 74, right hemisphere
167.9
2795
Female, age 91, both hemispheres
166.1
2126
Male, age 61, both hemispheres
159.8
2327
Male, age 80, both hemispheres
154.3
2062
Male, age 76, both hemispheres
119.6
Motor trigeminal nucleus nTPM: 153.2
2560
Male, age 74, both hemispheres
177.3
2079
Male, age 80, both hemispheres
161.9
2321
Female, age 91, both hemispheres
153.9
2309
Male, age 76, both hemispheres
143.7
2335
Male, age 61, both hemispheres
129.3
Nuclei of the trapezoid body nTPM: 153.5
2159
Male, age 61, both hemispheres
185.1
2166
Male, age 80, both hemispheres
163.5
2368
Female, age 91, both hemispheres
149.8
2735
Female, age 85, both hemispheres
136.7
1983
Male, age 76, both hemispheres
132.5
Nucleus raphe magnus nTPM: 171.9
2160
Male, age 61, both hemispheres
266.4
2328
Male, age 80, both hemispheres
166.3
2455
Male, age 74, both hemispheres
154.9
2459
Female, age 91, both hemispheres
154.7
2172
Female, age 85, both hemispheres
148.7
2051
Male, age 76, both hemispheres
140.7
Paramedian reticular nucleus nTPM: 158.1
2050
Female, age 85, both hemispheres
174.9
2052
Male, age 76, both hemispheres
162.5
2057
Male, age 80, both hemispheres
153.4
2313
Male, age 61, both hemispheres
141.7
Pedunculopontine tegmental nucleus nTPM: 144.2
2334
Male, age 80, both hemispheres
169.2
1921
Female, age 85, both hemispheres
133.5
2338
Male, age 61, both hemispheres
130.1
Pontine nuclei nTPM: 181.9
2727
Male, age 61, right hemisphere
267.0
2787
Female, age 85, both hemispheres
191.0
1863
Male, age 55, unknown
185.4
2319
Female, age 91, both hemispheres
173.7
2454
Male, age 74, left hemisphere
173.0
2109
Female, age 72, unknown
170.1
2115
Male, age 80, left hemisphere
168.2
1968
Male, age 76, left hemisphere
126.7
Pontine raphe nucleus nTPM: 153.4
2122
Female, age 85, midline
159.3
2853
Male, age 76, midline
147.5
Posteroventral cochlear nucleus nTPM: 180.1
2341
Male, age 80, both hemispheres
231.2
2135
Female, age 91, both hemispheres
204.6
2070
Male, age 76, both hemispheres
176.6
2371
Male, age 61, both hemispheres
149.4
2752
Female, age 85, both hemispheres
138.7
Principal sensory trigeminal nucleus nTPM: 168.4
2158
Male, age 61, both hemispheres
216.1
2367
Female, age 91, left hemisphere
165.0
2324
Male, age 76, both hemispheres
148.2
2008
Male, age 80, left hemisphere
144.3
Reticular pontine nucleus, caudal nTPM: 161.5
2332
Male, age 80, right hemisphere
171.5
2559
Male, age 74, both hemispheres
169.9
2457
Female, age 91, both hemispheres
158.2
2092
Male, age 76, both hemispheres
146.5
Reticular pontine nucleus, oral nTPM: 169.2
1939
Male, age 80, both hemispheres
180.7
2361
Male, age 74, both hemispheres
176.1
2012
Female, age 85, both hemispheres
165.7
2366
Female, age 91, both hemispheres
163.3
2167
Male, age 76, both hemispheres
160.2
Reticulotegmental nucleus nTPM: 171.3
2322
Female, age 91, both hemispheres
193.0
2333
Male, age 80, both hemispheres
185.1
2452
Male, age 74, both hemispheres
172.5
2325
Male, age 76, both hemispheres
134.6
Spinal trigeminal nucleus, oral nTPM: 153.6
2164
Male, age 80, both hemispheres
177.8
2737
Female, age 85, both hemispheres
148.4
1978
Male, age 76, both hemispheres
134.7
Subcoeruleus area nTPM: 158.8
2369
Female, age 85, left hemisphere
211.1
1958
Male, age 80, both hemispheres
158.4
2451
Male, age 74, both hemispheres
154.5
2323
Female, age 91, left hemisphere
151.2
2089
Male, age 76, left hemisphere
119.1
Superior olive nTPM: 158.7
2329
Male, age 80, right hemisphere
167.4
2364
Male, age 74, right hemisphere
163.1
1875
Female, age 85, both hemispheres
161.4
2561
Female, age 91, both hemispheres
154.0
2020
Male, age 76, both hemispheres
147.8
Ventral periolivary nuclei nTPM: 147.6
2165
Male, age 80, both hemispheres
155.0
2023
Male, age 76, both hemispheres
151.6
2130
Female, age 85, both hemispheres
142.0
2794
Female, age 91, left hemisphere
141.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 159.6
2840
Female, age 85, both hemispheres
206.2
2449
Male, age 74, both hemispheres
165.9
2161
Male, age 80, both hemispheres
165.1
2456
Female, age 91, both hemispheres
160.7
1959
Male, age 76, both hemispheres
135.6
2359
Male, age 61, both hemispheres
123.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
132.3
Pig sample
Sample description
nTPM
Pons nTPM: 132.3
Samples: 4
Max nTPM: 152.9
Min nTPM: 93.8
Sample A
Female
152.9
Sample B
Female
93.8
Sample C
Male
130.3
Sample D
Male
152.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
