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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
31.8
nTPM
Monaco:
351.5
nTPM
Schmiedel:
612.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
31.8
HPA sample
nTPM
gdT-cell nTPM: 20.1
Samples: 6
Max nTPM: 31.2
Min nTPM: 11.9
P10809_1007
24.3
P10809_1022
18.7
P10809_1041
11.9
P10809_1060
31.2
P10809_1077
18.8
P10809_1098
15.7
MAIT T-cell nTPM: 26.4
Samples: 6
Max nTPM: 35.1
Min nTPM: 10.6
P10809_1006
34.6
P10809_1024
35.1
P10809_1043
34.8
P10809_1062
24.7
P10809_1083
18.5
P10809_1097
10.6
Memory CD4 T-cell nTPM: 27.7
Samples: 6
Max nTPM: 40.9
Min nTPM: 16.3
P10809_1014
32.2
P10809_1026
40.9
P10809_1045
32.2
P10809_1064
17.4
P10809_1086
16.3
P10809_1113
27.2
Memory CD8 T-cell nTPM: 26.6
Samples: 5
Max nTPM: 34.7
Min nTPM: 14.3
P10809_1012
25.7
P10809_1027
34.7
P10809_1046
28.7
P10809_1065
14.3
P10809_1111
29.7
Naive CD4 T-cell nTPM: 28.8
Samples: 6
Max nTPM: 36.4
Min nTPM: 14.1
P10809_1015
36.4
P10809_1030
34.0
P10809_1049
31.2
P10809_1068
26.2
P10809_1085
14.1
P10809_1112
30.8
Naive CD8 T-cell nTPM: 26.8
Samples: 6
Max nTPM: 42.2
Min nTPM: 16.5
P10809_1016
35.1
P10809_1031
42.2
P10809_1050
33.4
P10809_1069
16.5
P10809_1087
16.7
P10809_1110
16.7
T-reg nTPM: 31.8
Samples: 6
Max nTPM: 42.7
Min nTPM: 25.0
P10809_1018
42.7
P10809_1037
27.7
P10809_1056
35.4
P10809_1075
30.6
P10809_1094
29.1
P10809_1106
25.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
351.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 257.0
Samples: 4
Max nTPM: 333.0
Min nTPM: 140.2
RHH5202_R3573
280.8
RHH5230_R3602
333.0
RHH5259_R3631
140.2
RHH5288_R3660
274.0
Effector memory CD8 T-cell nTPM: 217.8
Samples: 4
Max nTPM: 297.0
Min nTPM: 142.0
RHH5203_R3574
297.0
RHH5231_R3603
204.5
RHH5260_R3632
142.0
RHH5289_R3661
227.8
MAIT T-cell nTPM: 342.6
Samples: 4
Max nTPM: 392.4
Min nTPM: 275.1
RHH5233_R3605
392.4
RHH5205_R3576
275.1
RHH5262_R3634
349.6
RHH5297_R3663
353.1
Memory CD4 T-cell TFH nTPM: 240.5
Samples: 4
Max nTPM: 319.5
Min nTPM: 145.5
RHH5300_R3666
319.5
RHH5236_R3608
145.5
RHH5265_R3637
238.1
RHH5208_R3579
258.8
Memory CD4 T-cell Th1 nTPM: 252.1
Samples: 4
Max nTPM: 331.5
Min nTPM: 148.6
RHH5210_R3581
294.2
RHH5302_R3668
331.5
RHH5238_R3610
148.6
RHH5267_R3639
234.1
Memory CD4 T-cell Th1/Th17 nTPM: 241.0
Samples: 4
Max nTPM: 303.3
Min nTPM: 168.1
RHH5303_R3669
272.8
RHH5211_R3582
303.3
RHH5239_R3611
168.1
RHH5268_R3640
219.6
Memory CD4 T-cell Th17 nTPM: 255.7
Samples: 4
Max nTPM: 318.1
Min nTPM: 176.1
RHH5304_R3670
295.8
RHH5212_R3583
318.1
RHH5240_R3612
176.1
RHH5269_R3641
232.9
Memory CD4 T-cell Th2 nTPM: 351.5
Samples: 4
Max nTPM: 383.7
Min nTPM: 329.2
RHH5305_R3671
357.4
RHH5213_R3584
383.7
RHH5241_R3613
335.5
RHH5270_R3642
329.2
Naive CD4 T-cell nTPM: 233.2
Samples: 4
Max nTPM: 314.4
Min nTPM: 185.1
RHH5306_R3672
314.4
RHH5214_R3585
185.1
RHH5242_R3614
213.5
RHH5271_R3643
219.9
Naive CD8 T-cell nTPM: 217.2
Samples: 4
Max nTPM: 320.0
Min nTPM: 103.4
RHH5201_R3572
320.0
RHH5229_R3601
103.4
RHH5258_R3630
234.6
RHH5287_R3659
210.6
Non-Vd2 gdTCR nTPM: 264.0
Samples: 4
Max nTPM: 335.1
Min nTPM: 193.9
RHH5235_R3607
260.7
RHH5264_R3636
193.9
RHH5207_R3578
266.4
RHH5299_R3665
335.1
T-reg nTPM: 232.4
Samples: 4
Max nTPM: 283.5
Min nTPM: 197.7
RHH5301_R3667
283.5
RHH5237_R3609
197.7
RHH5266_R3638
240.8
RHH5209_R3580
207.7
Terminal effector memory CD4 T-cell nTPM: 206.0
Samples: 2
Max nTPM: 234.3
Min nTPM: 177.7
RHH5243_R3615
177.7
RHH5272_R3644
234.3
Terminal effector memory CD8 T-cell nTPM: 243.6
Samples: 4
Max nTPM: 310.1
Min nTPM: 178.3
RHH5232_R3604
237.5
RHH5204_R3575
248.4
RHH5261_R3633
178.3
RHH5296_R3662
310.1
Vd2 gdTCR nTPM: 291.9
Samples: 4
Max nTPM: 343.4
Min nTPM: 188.3
RHH5234_R3606
343.4
RHH5206_R3577
306.3
RHH5263_R3635
188.3
RHH5298_R3664
329.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
