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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
55.7
nTPM
Monaco:
371.8
nTPM
Schmiedel:
157.5
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
55.7
HPA sample
nTPM
gdT-cell nTPM: 34.0
Samples: 6
Max nTPM: 46.1
Min nTPM: 23.3
P10809_1007
46.1
P10809_1022
34.1
P10809_1041
23.3
P10809_1060
29.1
P10809_1077
33.7
P10809_1098
37.9
MAIT T-cell nTPM: 55.7
Samples: 6
Max nTPM: 93.5
Min nTPM: 42.3
P10809_1006
93.5
P10809_1024
50.5
P10809_1043
42.3
P10809_1062
49.0
P10809_1083
49.9
P10809_1097
49.1
Memory CD4 T-cell nTPM: 30.9
Samples: 6
Max nTPM: 45.9
Min nTPM: 21.7
P10809_1014
45.9
P10809_1026
21.7
P10809_1045
29.8
P10809_1064
23.2
P10809_1086
32.5
P10809_1113
32.3
Memory CD8 T-cell nTPM: 34.1
Samples: 5
Max nTPM: 53.1
Min nTPM: 23.4
P10809_1012
53.1
P10809_1027
23.4
P10809_1046
35.4
P10809_1065
24.7
P10809_1111
33.9
Naive CD4 T-cell nTPM: 27.2
Samples: 6
Max nTPM: 29.2
Min nTPM: 21.0
P10809_1015
29.2
P10809_1030
27.7
P10809_1049
21.0
P10809_1068
27.2
P10809_1085
28.9
P10809_1112
29.1
Naive CD8 T-cell nTPM: 27.9
Samples: 6
Max nTPM: 38.4
Min nTPM: 23.6
P10809_1016
38.4
P10809_1031
24.3
P10809_1050
23.6
P10809_1069
24.9
P10809_1087
30.5
P10809_1110
25.8
T-reg nTPM: 29.8
Samples: 6
Max nTPM: 42.0
Min nTPM: 13.8
P10809_1018
36.0
P10809_1037
20.1
P10809_1056
42.0
P10809_1075
13.8
P10809_1094
33.2
P10809_1106
33.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
371.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 205.0
Samples: 4
Max nTPM: 252.8
Min nTPM: 165.1
RHH5202_R3573
252.8
RHH5230_R3602
179.7
RHH5259_R3631
222.4
RHH5288_R3660
165.1
Effector memory CD8 T-cell nTPM: 159.8
Samples: 4
Max nTPM: 220.0
Min nTPM: 105.4
RHH5203_R3574
220.0
RHH5231_R3603
105.4
RHH5260_R3632
149.5
RHH5289_R3661
164.2
MAIT T-cell nTPM: 371.8
Samples: 4
Max nTPM: 480.8
Min nTPM: 308.2
RHH5233_R3605
373.0
RHH5205_R3576
480.8
RHH5262_R3634
308.2
RHH5297_R3663
325.1
Memory CD4 T-cell TFH nTPM: 159.5
Samples: 4
Max nTPM: 175.0
Min nTPM: 142.7
RHH5300_R3666
154.3
RHH5236_R3608
175.0
RHH5265_R3637
165.8
RHH5208_R3579
142.7
Memory CD4 T-cell Th1 nTPM: 174.6
Samples: 4
Max nTPM: 184.7
Min nTPM: 164.3
RHH5210_R3581
172.9
RHH5302_R3668
164.3
RHH5238_R3610
184.7
RHH5267_R3639
176.5
Memory CD4 T-cell Th1/Th17 nTPM: 239.2
Samples: 4
Max nTPM: 250.7
Min nTPM: 225.3
RHH5303_R3669
243.9
RHH5211_R3582
250.7
RHH5239_R3611
236.9
RHH5268_R3640
225.3
Memory CD4 T-cell Th17 nTPM: 225.0
Samples: 4
Max nTPM: 256.4
Min nTPM: 189.4
RHH5304_R3670
256.4
RHH5212_R3583
244.2
RHH5240_R3612
189.4
RHH5269_R3641
210.1
Memory CD4 T-cell Th2 nTPM: 161.8
Samples: 4
Max nTPM: 183.8
Min nTPM: 140.7
RHH5305_R3671
140.7
RHH5213_R3584
180.9
RHH5241_R3613
183.8
RHH5270_R3642
141.9
Naive CD4 T-cell nTPM: 164.4
Samples: 4
Max nTPM: 205.8
Min nTPM: 138.0
RHH5306_R3672
138.0
RHH5214_R3585
157.6
RHH5242_R3614
205.8
RHH5271_R3643
156.2
Naive CD8 T-cell nTPM: 189.0
Samples: 4
Max nTPM: 216.4
Min nTPM: 160.2
RHH5201_R3572
200.7
RHH5229_R3601
178.6
RHH5258_R3630
160.2
RHH5287_R3659
216.4
Non-Vd2 gdTCR nTPM: 109.6
Samples: 4
Max nTPM: 118.0
Min nTPM: 99.5
RHH5235_R3607
107.0
RHH5264_R3636
99.5
RHH5207_R3578
114.0
RHH5299_R3665
118.0
T-reg nTPM: 111.7
Samples: 4
Max nTPM: 119.0
Min nTPM: 101.0
RHH5301_R3667
113.2
RHH5237_R3609
101.0
RHH5266_R3638
113.4
RHH5209_R3580
119.0
Terminal effector memory CD4 T-cell nTPM: 135.5
Samples: 2
Max nTPM: 143.7
Min nTPM: 127.2
RHH5243_R3615
143.7
RHH5272_R3644
127.2
Terminal effector memory CD8 T-cell nTPM: 153.6
Samples: 4
Max nTPM: 208.9
Min nTPM: 111.6
RHH5232_R3604
208.9
RHH5204_R3575
179.3
RHH5261_R3633
114.5
RHH5296_R3662
111.6
Vd2 gdTCR nTPM: 220.1
Samples: 4
Max nTPM: 284.7
Min nTPM: 180.8
RHH5234_R3606
284.7
RHH5206_R3577
180.8
RHH5263_R3635
209.2
RHH5298_R3664
205.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
