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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
250.5
nTPM
Monaco:
537.8
nTPM
Schmiedel:
46.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
250.5
HPA sample
nTPM
gdT-cell nTPM: 250.5
Samples: 6
Max nTPM: 289.7
Min nTPM: 165.3
P10809_1007
165.3
P10809_1022
281.9
P10809_1041
289.7
P10809_1060
237.7
P10809_1077
263.9
P10809_1098
264.4
MAIT T-cell nTPM: 71.3
Samples: 6
Max nTPM: 86.5
Min nTPM: 57.0
P10809_1006
57.0
P10809_1024
86.5
P10809_1043
72.2
P10809_1062
71.3
P10809_1083
62.8
P10809_1097
77.9
Memory CD4 T-cell nTPM: 57.6
Samples: 6
Max nTPM: 97.4
Min nTPM: 30.1
P10809_1014
36.1
P10809_1026
30.1
P10809_1045
40.8
P10809_1064
95.4
P10809_1086
97.4
P10809_1113
45.9
Memory CD8 T-cell nTPM: 187.8
Samples: 5
Max nTPM: 222.5
Min nTPM: 137.0
P10809_1012
137.0
P10809_1027
183.4
P10809_1046
210.7
P10809_1065
222.5
P10809_1111
185.4
Naive CD4 T-cell nTPM: 28.1
Samples: 6
Max nTPM: 54.6
Min nTPM: 15.8
P10809_1015
18.0
P10809_1030
15.8
P10809_1049
28.5
P10809_1068
26.5
P10809_1085
54.6
P10809_1112
25.2
Naive CD8 T-cell nTPM: 164.5
Samples: 6
Max nTPM: 239.1
Min nTPM: 80.8
P10809_1016
80.8
P10809_1031
161.0
P10809_1050
174.7
P10809_1069
199.5
P10809_1087
239.1
P10809_1110
131.9
T-reg nTPM: 72.3
Samples: 6
Max nTPM: 102.9
Min nTPM: 53.2
P10809_1018
74.2
P10809_1037
59.8
P10809_1056
53.2
P10809_1075
55.5
P10809_1094
102.9
P10809_1106
88.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
537.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 216.5
Samples: 4
Max nTPM: 304.4
Min nTPM: 160.0
RHH5202_R3573
304.4
RHH5230_R3602
160.0
RHH5259_R3631
179.1
RHH5288_R3660
222.3
Effector memory CD8 T-cell nTPM: 410.9
Samples: 4
Max nTPM: 488.2
Min nTPM: 316.5
RHH5203_R3574
430.7
RHH5231_R3603
408.2
RHH5260_R3632
316.5
RHH5289_R3661
488.2
MAIT T-cell nTPM: 139.1
Samples: 4
Max nTPM: 193.2
Min nTPM: 109.8
RHH5233_R3605
117.6
RHH5205_R3576
193.2
RHH5262_R3634
135.7
RHH5297_R3663
109.8
Memory CD4 T-cell TFH nTPM: 84.2
Samples: 4
Max nTPM: 113.2
Min nTPM: 57.9
RHH5300_R3666
74.9
RHH5236_R3608
57.9
RHH5265_R3637
90.7
RHH5208_R3579
113.2
Memory CD4 T-cell Th1 nTPM: 102.9
Samples: 4
Max nTPM: 119.4
Min nTPM: 94.7
RHH5210_R3581
119.4
RHH5302_R3668
100.2
RHH5238_R3610
97.1
RHH5267_R3639
94.7
Memory CD4 T-cell Th1/Th17 nTPM: 90.6
Samples: 4
Max nTPM: 107.2
Min nTPM: 79.3
RHH5303_R3669
94.0
RHH5211_R3582
107.2
RHH5239_R3611
79.3
RHH5268_R3640
81.7
Memory CD4 T-cell Th17 nTPM: 75.2
Samples: 4
Max nTPM: 82.9
Min nTPM: 66.0
RHH5304_R3670
71.4
RHH5212_R3583
82.9
RHH5240_R3612
80.4
RHH5269_R3641
66.0
Memory CD4 T-cell Th2 nTPM: 64.0
Samples: 4
Max nTPM: 75.3
Min nTPM: 56.1
RHH5305_R3671
56.1
RHH5213_R3584
75.3
RHH5241_R3613
67.5
RHH5270_R3642
57.1
Naive CD4 T-cell nTPM: 55.6
Samples: 4
Max nTPM: 70.7
Min nTPM: 46.7
RHH5306_R3672
50.1
RHH5214_R3585
46.7
RHH5242_R3614
70.7
RHH5271_R3643
54.7
Naive CD8 T-cell nTPM: 132.7
Samples: 4
Max nTPM: 162.4
Min nTPM: 100.1
RHH5201_R3572
100.1
RHH5229_R3601
108.2
RHH5258_R3630
159.9
RHH5287_R3659
162.4
Non-Vd2 gdTCR nTPM: 503.7
Samples: 4
Max nTPM: 593.5
Min nTPM: 412.8
RHH5235_R3607
579.2
RHH5264_R3636
429.2
RHH5207_R3578
593.5
RHH5299_R3665
412.8
T-reg nTPM: 77.5
Samples: 4
Max nTPM: 84.4
Min nTPM: 64.9
RHH5301_R3667
64.9
RHH5237_R3609
84.4
RHH5266_R3638
82.2
RHH5209_R3580
78.5
Terminal effector memory CD4 T-cell nTPM: 460.1
Samples: 2
Max nTPM: 664.8
Min nTPM: 255.4
RHH5243_R3615
664.8
RHH5272_R3644
255.4
Terminal effector memory CD8 T-cell nTPM: 537.8
Samples: 4
Max nTPM: 573.4
Min nTPM: 481.5
RHH5232_R3604
573.4
RHH5204_R3575
547.7
RHH5261_R3633
548.5
RHH5296_R3662
481.5
Vd2 gdTCR nTPM: 361.6
Samples: 4
Max nTPM: 549.3
Min nTPM: 253.2
RHH5234_R3606
304.1
RHH5206_R3577
549.3
RHH5263_R3635
339.9
RHH5298_R3664
253.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
