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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1158.5
nTPM
Monaco:
1371.8
nTPM
Schmiedel:
1109.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1158.5
HPA sample
nTPM
gdT-cell nTPM: 966.9
Samples: 6
Max nTPM: 1234.7
Min nTPM: 735.9
P10809_1007
934.2
P10809_1022
1234.7
P10809_1041
1123.3
P10809_1060
735.9
P10809_1077
900.1
P10809_1098
873.2
MAIT T-cell nTPM: 728.5
Samples: 6
Max nTPM: 845.5
Min nTPM: 658.9
P10809_1006
734.7
P10809_1024
757.3
P10809_1043
845.5
P10809_1062
658.9
P10809_1083
679.9
P10809_1097
694.7
Memory CD4 T-cell nTPM: 765.7
Samples: 6
Max nTPM: 867.4
Min nTPM: 718.9
P10809_1014
719.8
P10809_1026
867.4
P10809_1045
805.8
P10809_1064
756.8
P10809_1086
725.7
P10809_1113
718.9
Memory CD8 T-cell nTPM: 852.6
Samples: 5
Max nTPM: 971.7
Min nTPM: 767.7
P10809_1012
879.5
P10809_1027
870.7
P10809_1046
971.7
P10809_1065
773.4
P10809_1111
767.7
Naive CD4 T-cell nTPM: 582.7
Samples: 6
Max nTPM: 626.8
Min nTPM: 553.1
P10809_1015
604.7
P10809_1030
557.1
P10809_1049
575.7
P10809_1068
578.8
P10809_1085
626.8
P10809_1112
553.1
Naive CD8 T-cell nTPM: 757.2
Samples: 6
Max nTPM: 850.7
Min nTPM: 648.8
P10809_1016
766.7
P10809_1031
712.5
P10809_1050
773.0
P10809_1069
850.7
P10809_1087
791.4
P10809_1110
648.8
T-reg nTPM: 1158.5
Samples: 6
Max nTPM: 1239.5
Min nTPM: 1082.2
P10809_1018
1137.5
P10809_1037
1089.6
P10809_1056
1239.5
P10809_1075
1082.2
P10809_1094
1226.7
P10809_1106
1175.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1371.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 987.2
Samples: 4
Max nTPM: 1284.8
Min nTPM: 640.3
RHH5202_R3573
1099.5
RHH5230_R3602
924.0
RHH5259_R3631
640.3
RHH5288_R3660
1284.8
Effector memory CD8 T-cell nTPM: 1216.3
Samples: 4
Max nTPM: 1507.6
Min nTPM: 817.9
RHH5203_R3574
1507.6
RHH5231_R3603
1292.2
RHH5260_R3632
817.9
RHH5289_R3661
1247.3
MAIT T-cell nTPM: 1062.5
Samples: 4
Max nTPM: 1217.2
Min nTPM: 787.0
RHH5233_R3605
1168.3
RHH5205_R3576
787.0
RHH5262_R3634
1077.5
RHH5297_R3663
1217.2
Memory CD4 T-cell TFH nTPM: 1127.5
Samples: 4
Max nTPM: 1209.7
Min nTPM: 1001.5
RHH5300_R3666
1199.8
RHH5236_R3608
1001.5
RHH5265_R3637
1099.0
RHH5208_R3579
1209.7
Memory CD4 T-cell Th1 nTPM: 969.3
Samples: 4
Max nTPM: 1314.6
Min nTPM: 736.4
RHH5210_R3581
1009.3
RHH5302_R3668
1314.6
RHH5238_R3610
736.4
RHH5267_R3639
816.9
Memory CD4 T-cell Th1/Th17 nTPM: 911.6
Samples: 4
Max nTPM: 1244.6
Min nTPM: 474.4
RHH5303_R3669
1244.6
RHH5211_R3582
1202.8
RHH5239_R3611
474.4
RHH5268_R3640
724.4
Memory CD4 T-cell Th17 nTPM: 820.1
Samples: 4
Max nTPM: 1009.2
Min nTPM: 670.8
RHH5304_R3670
914.6
RHH5212_R3583
1009.2
RHH5240_R3612
670.8
RHH5269_R3641
685.9
Memory CD4 T-cell Th2 nTPM: 1072.3
Samples: 4
Max nTPM: 1183.2
Min nTPM: 891.3
RHH5305_R3671
1182.8
RHH5213_R3584
1031.7
RHH5241_R3613
1183.2
RHH5270_R3642
891.3
Naive CD4 T-cell nTPM: 899.4
Samples: 4
Max nTPM: 1010.2
Min nTPM: 731.0
RHH5306_R3672
1010.2
RHH5214_R3585
889.0
RHH5242_R3614
967.2
RHH5271_R3643
731.0
Naive CD8 T-cell nTPM: 897.6
Samples: 4
Max nTPM: 1104.9
Min nTPM: 524.2
RHH5201_R3572
1091.0
RHH5229_R3601
524.2
RHH5258_R3630
1104.9
RHH5287_R3659
870.2
Non-Vd2 gdTCR nTPM: 1371.8
Samples: 4
Max nTPM: 1711.8
Min nTPM: 872.2
RHH5235_R3607
872.2
RHH5264_R3636
1353.3
RHH5207_R3578
1550.0
RHH5299_R3665
1711.8
T-reg nTPM: 924.7
Samples: 4
Max nTPM: 1181.0
Min nTPM: 738.8
RHH5301_R3667
1181.0
RHH5237_R3609
1022.6
RHH5266_R3638
738.8
RHH5209_R3580
756.5
Terminal effector memory CD4 T-cell nTPM: 972.2
Samples: 2
Max nTPM: 1146.7
Min nTPM: 797.7
RHH5243_R3615
797.7
RHH5272_R3644
1146.7
Terminal effector memory CD8 T-cell nTPM: 1338.9
Samples: 4
Max nTPM: 1576.2
Min nTPM: 985.2
RHH5232_R3604
1430.2
RHH5204_R3575
1363.8
RHH5261_R3633
985.2
RHH5296_R3662
1576.2
Vd2 gdTCR nTPM: 1291.6
Samples: 4
Max nTPM: 1587.1
Min nTPM: 914.2
RHH5234_R3606
1240.1
RHH5206_R3577
1587.1
RHH5263_R3635
914.2
RHH5298_R3664
1424.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
