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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
216.7
nTPM
Monaco:
193.2
nTPM
Schmiedel:
44.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
216.7
HPA sample
nTPM
gdT-cell nTPM: 154.9
Samples: 6
Max nTPM: 196.9
Min nTPM: 95.2
P10809_1007
95.2
P10809_1022
167.6
P10809_1041
196.9
P10809_1060
144.2
P10809_1077
179.3
P10809_1098
146.0
MAIT T-cell nTPM: 170.3
Samples: 6
Max nTPM: 213.5
Min nTPM: 98.9
P10809_1006
98.9
P10809_1024
200.2
P10809_1043
193.1
P10809_1062
159.0
P10809_1083
157.3
P10809_1097
213.5
Memory CD4 T-cell nTPM: 171.2
Samples: 6
Max nTPM: 194.2
Min nTPM: 111.6
P10809_1014
111.6
P10809_1026
190.9
P10809_1045
187.2
P10809_1064
168.8
P10809_1086
194.2
P10809_1113
174.3
Memory CD8 T-cell nTPM: 185.7
Samples: 5
Max nTPM: 216.8
Min nTPM: 108.0
P10809_1012
108.0
P10809_1027
190.7
P10809_1046
203.0
P10809_1065
216.8
P10809_1111
210.1
Naive CD4 T-cell nTPM: 172.8
Samples: 6
Max nTPM: 252.5
Min nTPM: 93.0
P10809_1015
93.0
P10809_1030
164.7
P10809_1049
252.5
P10809_1068
164.3
P10809_1085
208.6
P10809_1112
153.7
Naive CD8 T-cell nTPM: 169.3
Samples: 6
Max nTPM: 210.1
Min nTPM: 94.0
P10809_1016
94.0
P10809_1031
169.2
P10809_1050
171.4
P10809_1069
210.1
P10809_1087
203.3
P10809_1110
168.0
T-reg nTPM: 216.7
Samples: 6
Max nTPM: 363.3
Min nTPM: 131.4
P10809_1018
131.4
P10809_1037
193.7
P10809_1056
363.3
P10809_1075
190.0
P10809_1094
197.8
P10809_1106
224.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
193.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 124.8
Samples: 4
Max nTPM: 175.1
Min nTPM: 71.4
RHH5202_R3573
151.2
RHH5230_R3602
101.3
RHH5259_R3631
71.4
RHH5288_R3660
175.1
Effector memory CD8 T-cell nTPM: 123.9
Samples: 4
Max nTPM: 157.5
Min nTPM: 79.8
RHH5203_R3574
155.7
RHH5231_R3603
157.5
RHH5260_R3632
102.4
RHH5289_R3661
79.8
MAIT T-cell nTPM: 136.5
Samples: 4
Max nTPM: 172.9
Min nTPM: 97.3
RHH5233_R3605
125.2
RHH5205_R3576
97.3
RHH5262_R3634
150.5
RHH5297_R3663
172.9
Memory CD4 T-cell TFH nTPM: 152.8
Samples: 4
Max nTPM: 213.7
Min nTPM: 113.4
RHH5300_R3666
130.0
RHH5236_R3608
213.7
RHH5265_R3637
113.4
RHH5208_R3579
154.1
Memory CD4 T-cell Th1 nTPM: 118.5
Samples: 4
Max nTPM: 181.8
Min nTPM: 68.3
RHH5210_R3581
107.4
RHH5302_R3668
181.8
RHH5238_R3610
116.6
RHH5267_R3639
68.3
Memory CD4 T-cell Th1/Th17 nTPM: 141.5
Samples: 4
Max nTPM: 236.7
Min nTPM: 88.5
RHH5303_R3669
236.7
RHH5211_R3582
147.8
RHH5239_R3611
93.0
RHH5268_R3640
88.5
Memory CD4 T-cell Th17 nTPM: 91.9
Samples: 4
Max nTPM: 120.0
Min nTPM: 68.1
RHH5304_R3670
104.1
RHH5212_R3583
120.0
RHH5240_R3612
75.4
RHH5269_R3641
68.1
Memory CD4 T-cell Th2 nTPM: 115.4
Samples: 4
Max nTPM: 143.6
Min nTPM: 78.1
RHH5305_R3671
129.0
RHH5213_R3584
110.7
RHH5241_R3613
143.6
RHH5270_R3642
78.1
Naive CD4 T-cell nTPM: 117.1
Samples: 4
Max nTPM: 162.5
Min nTPM: 68.6
RHH5306_R3672
162.5
RHH5214_R3585
128.5
RHH5242_R3614
108.8
RHH5271_R3643
68.6
Naive CD8 T-cell nTPM: 88.8
Samples: 4
Max nTPM: 111.7
Min nTPM: 68.7
RHH5201_R3572
105.7
RHH5229_R3601
68.7
RHH5258_R3630
111.7
RHH5287_R3659
69.2
Non-Vd2 gdTCR nTPM: 153.3
Samples: 4
Max nTPM: 224.6
Min nTPM: 78.2
RHH5235_R3607
78.2
RHH5264_R3636
167.8
RHH5207_R3578
142.5
RHH5299_R3665
224.6
T-reg nTPM: 128.2
Samples: 4
Max nTPM: 182.4
Min nTPM: 67.9
RHH5301_R3667
182.4
RHH5237_R3609
171.0
RHH5266_R3638
67.9
RHH5209_R3580
91.5
Terminal effector memory CD4 T-cell nTPM: 117.3
Samples: 2
Max nTPM: 162.1
Min nTPM: 72.5
RHH5243_R3615
72.5
RHH5272_R3644
162.1
Terminal effector memory CD8 T-cell nTPM: 193.2
Samples: 4
Max nTPM: 319.3
Min nTPM: 127.5
RHH5232_R3604
140.7
RHH5204_R3575
319.3
RHH5261_R3633
127.5
RHH5296_R3662
185.3
Vd2 gdTCR nTPM: 181.5
Samples: 4
Max nTPM: 259.5
Min nTPM: 97.0
RHH5234_R3606
138.4
RHH5206_R3577
259.5
RHH5263_R3635
97.0
RHH5298_R3664
231.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
