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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
318.3
nTPM
Monaco:
119.2
nTPM
Schmiedel:
168.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
318.3
HPA sample
nTPM
gdT-cell nTPM: 245.2
Samples: 6
Max nTPM: 282.0
Min nTPM: 188.3
P10809_1007
188.3
P10809_1022
282.0
P10809_1041
269.9
P10809_1060
218.7
P10809_1077
265.7
P10809_1098
246.8
MAIT T-cell nTPM: 238.5
Samples: 6
Max nTPM: 309.7
Min nTPM: 155.5
P10809_1006
155.5
P10809_1024
309.7
P10809_1043
231.7
P10809_1062
232.1
P10809_1083
206.7
P10809_1097
295.4
Memory CD4 T-cell nTPM: 248.4
Samples: 6
Max nTPM: 300.9
Min nTPM: 176.8
P10809_1014
176.8
P10809_1026
300.9
P10809_1045
268.0
P10809_1064
263.6
P10809_1086
239.6
P10809_1113
241.4
Memory CD8 T-cell nTPM: 239.7
Samples: 5
Max nTPM: 278.7
Min nTPM: 166.1
P10809_1012
166.1
P10809_1027
278.7
P10809_1046
259.0
P10809_1065
257.7
P10809_1111
237.2
Naive CD4 T-cell nTPM: 236.6
Samples: 6
Max nTPM: 315.1
Min nTPM: 158.9
P10809_1015
158.9
P10809_1030
245.2
P10809_1049
315.1
P10809_1068
229.0
P10809_1085
229.6
P10809_1112
242.0
Naive CD8 T-cell nTPM: 239.4
Samples: 6
Max nTPM: 295.1
Min nTPM: 190.1
P10809_1016
190.1
P10809_1031
295.1
P10809_1050
229.4
P10809_1069
278.1
P10809_1087
240.1
P10809_1110
203.7
T-reg nTPM: 318.3
Samples: 6
Max nTPM: 378.6
Min nTPM: 209.0
P10809_1018
209.0
P10809_1037
361.1
P10809_1056
378.6
P10809_1075
344.9
P10809_1094
296.1
P10809_1106
320.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
119.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 60.7
Samples: 4
Max nTPM: 80.6
Min nTPM: 39.6
RHH5202_R3573
39.6
RHH5230_R3602
52.8
RHH5259_R3631
69.7
RHH5288_R3660
80.6
Effector memory CD8 T-cell nTPM: 55.2
Samples: 4
Max nTPM: 73.7
Min nTPM: 46.7
RHH5203_R3574
53.0
RHH5231_R3603
46.7
RHH5260_R3632
73.7
RHH5289_R3661
47.4
MAIT T-cell nTPM: 69.8
Samples: 4
Max nTPM: 84.2
Min nTPM: 51.7
RHH5233_R3605
51.7
RHH5205_R3576
84.2
RHH5262_R3634
63.1
RHH5297_R3663
80.3
Memory CD4 T-cell TFH nTPM: 61.3
Samples: 4
Max nTPM: 93.7
Min nTPM: 38.3
RHH5300_R3666
67.2
RHH5236_R3608
93.7
RHH5265_R3637
45.8
RHH5208_R3579
38.3
Memory CD4 T-cell Th1 nTPM: 80.2
Samples: 4
Max nTPM: 111.5
Min nTPM: 42.0
RHH5210_R3581
42.0
RHH5302_R3668
111.5
RHH5238_R3610
93.0
RHH5267_R3639
74.4
Memory CD4 T-cell Th1/Th17 nTPM: 67.0
Samples: 4
Max nTPM: 99.9
Min nTPM: 44.6
RHH5303_R3669
99.9
RHH5211_R3582
47.4
RHH5239_R3611
44.6
RHH5268_R3640
76.0
Memory CD4 T-cell Th17 nTPM: 55.5
Samples: 4
Max nTPM: 66.6
Min nTPM: 48.4
RHH5304_R3670
66.6
RHH5212_R3583
48.4
RHH5240_R3612
53.9
RHH5269_R3641
53.1
Memory CD4 T-cell Th2 nTPM: 62.8
Samples: 4
Max nTPM: 80.8
Min nTPM: 53.3
RHH5305_R3671
80.8
RHH5213_R3584
58.9
RHH5241_R3613
53.3
RHH5270_R3642
58.2
Naive CD4 T-cell nTPM: 67.9
Samples: 4
Max nTPM: 98.4
Min nTPM: 40.9
RHH5306_R3672
76.7
RHH5214_R3585
98.4
RHH5242_R3614
40.9
RHH5271_R3643
55.7
Naive CD8 T-cell nTPM: 60.3
Samples: 4
Max nTPM: 88.8
Min nTPM: 39.1
RHH5201_R3572
39.1
RHH5229_R3601
88.8
RHH5258_R3630
39.5
RHH5287_R3659
73.9
Non-Vd2 gdTCR nTPM: 85.5
Samples: 4
Max nTPM: 141.0
Min nTPM: 62.0
RHH5235_R3607
62.6
RHH5264_R3636
76.3
RHH5207_R3578
62.0
RHH5299_R3665
141.0
T-reg nTPM: 74.9
Samples: 4
Max nTPM: 93.5
Min nTPM: 65.3
RHH5301_R3667
93.5
RHH5237_R3609
65.3
RHH5266_R3638
74.6
RHH5209_R3580
66.1
Terminal effector memory CD4 T-cell nTPM: 56.0
Samples: 2
Max nTPM: 62.1
Min nTPM: 49.8
RHH5243_R3615
62.1
RHH5272_R3644
49.8
Terminal effector memory CD8 T-cell nTPM: 104.6
Samples: 4
Max nTPM: 176.2
Min nTPM: 66.9
RHH5232_R3604
66.9
RHH5204_R3575
176.2
RHH5261_R3633
104.5
RHH5296_R3662
70.7
Vd2 gdTCR nTPM: 119.2
Samples: 4
Max nTPM: 195.9
Min nTPM: 52.7
RHH5234_R3606
52.7
RHH5206_R3577
195.9
RHH5263_R3635
93.4
RHH5298_R3664
134.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
