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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
75.7
nTPM
Monaco:
75.3
nTPM
Schmiedel:
61.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
75.7
HPA sample
nTPM
gdT-cell nTPM: 62.0
Samples: 6
Max nTPM: 82.7
Min nTPM: 53.8
P10809_1007
65.3
P10809_1022
53.8
P10809_1041
57.3
P10809_1060
56.8
P10809_1077
82.7
P10809_1098
56.3
MAIT T-cell nTPM: 60.0
Samples: 6
Max nTPM: 77.0
Min nTPM: 39.5
P10809_1006
55.5
P10809_1024
66.6
P10809_1043
58.3
P10809_1062
77.0
P10809_1083
39.5
P10809_1097
63.0
Memory CD4 T-cell nTPM: 68.1
Samples: 6
Max nTPM: 79.4
Min nTPM: 53.4
P10809_1014
74.1
P10809_1026
65.7
P10809_1045
53.4
P10809_1064
79.4
P10809_1086
69.2
P10809_1113
66.6
Memory CD8 T-cell nTPM: 75.6
Samples: 5
Max nTPM: 101.7
Min nTPM: 58.3
P10809_1012
72.0
P10809_1027
101.7
P10809_1046
61.4
P10809_1065
84.8
P10809_1111
58.3
Naive CD4 T-cell nTPM: 64.8
Samples: 6
Max nTPM: 81.5
Min nTPM: 46.0
P10809_1015
70.3
P10809_1030
65.5
P10809_1049
46.0
P10809_1068
81.5
P10809_1085
68.3
P10809_1112
57.2
Naive CD8 T-cell nTPM: 67.8
Samples: 6
Max nTPM: 76.8
Min nTPM: 50.3
P10809_1016
76.8
P10809_1031
68.2
P10809_1050
65.9
P10809_1069
68.8
P10809_1087
76.5
P10809_1110
50.3
T-reg nTPM: 74.6
Samples: 6
Max nTPM: 83.7
Min nTPM: 69.8
P10809_1018
72.7
P10809_1037
83.7
P10809_1056
71.6
P10809_1075
75.2
P10809_1094
69.8
P10809_1106
74.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
75.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 71.5
Samples: 4
Max nTPM: 101.7
Min nTPM: 39.6
RHH5202_R3573
39.6
RHH5230_R3602
75.6
RHH5259_R3631
101.7
RHH5288_R3660
69.1
Effector memory CD8 T-cell nTPM: 49.9
Samples: 4
Max nTPM: 68.5
Min nTPM: 35.0
RHH5203_R3574
56.4
RHH5231_R3603
35.0
RHH5260_R3632
68.5
RHH5289_R3661
39.6
MAIT T-cell nTPM: 47.7
Samples: 4
Max nTPM: 51.3
Min nTPM: 41.6
RHH5233_R3605
51.3
RHH5205_R3576
41.6
RHH5262_R3634
46.9
RHH5297_R3663
50.8
Memory CD4 T-cell TFH nTPM: 39.6
Samples: 4
Max nTPM: 53.9
Min nTPM: 26.3
RHH5300_R3666
53.9
RHH5236_R3608
26.3
RHH5265_R3637
45.5
RHH5208_R3579
32.7
Memory CD4 T-cell Th1 nTPM: 66.7
Samples: 4
Max nTPM: 87.2
Min nTPM: 55.7
RHH5210_R3581
55.7
RHH5302_R3668
87.2
RHH5238_R3610
59.5
RHH5267_R3639
64.5
Memory CD4 T-cell Th1/Th17 nTPM: 64.7
Samples: 4
Max nTPM: 106.8
Min nTPM: 38.1
RHH5303_R3669
38.1
RHH5211_R3582
48.0
RHH5239_R3611
65.7
RHH5268_R3640
106.8
Memory CD4 T-cell Th17 nTPM: 41.0
Samples: 4
Max nTPM: 53.1
Min nTPM: 25.9
RHH5304_R3670
39.7
RHH5212_R3583
53.1
RHH5240_R3612
25.9
RHH5269_R3641
45.4
Memory CD4 T-cell Th2 nTPM: 54.1
Samples: 4
Max nTPM: 67.6
Min nTPM: 40.4
RHH5305_R3671
67.6
RHH5213_R3584
40.4
RHH5241_R3613
41.5
RHH5270_R3642
66.8
Naive CD4 T-cell nTPM: 75.4
Samples: 4
Max nTPM: 91.3
Min nTPM: 48.4
RHH5306_R3672
91.3
RHH5214_R3585
89.3
RHH5242_R3614
48.4
RHH5271_R3643
72.4
Naive CD8 T-cell nTPM: 66.1
Samples: 4
Max nTPM: 76.5
Min nTPM: 54.1
RHH5201_R3572
54.1
RHH5229_R3601
75.1
RHH5258_R3630
76.5
RHH5287_R3659
58.5
Non-Vd2 gdTCR nTPM: 74.0
Samples: 4
Max nTPM: 98.0
Min nTPM: 62.8
RHH5235_R3607
71.7
RHH5264_R3636
63.3
RHH5207_R3578
98.0
RHH5299_R3665
62.8
T-reg nTPM: 59.4
Samples: 4
Max nTPM: 81.9
Min nTPM: 37.1
RHH5301_R3667
62.8
RHH5237_R3609
55.6
RHH5266_R3638
81.9
RHH5209_R3580
37.1
Terminal effector memory CD4 T-cell nTPM: 71.5
Samples: 2
Max nTPM: 74.1
Min nTPM: 68.9
RHH5243_R3615
68.9
RHH5272_R3644
74.1
Terminal effector memory CD8 T-cell nTPM: 68.5
Samples: 4
Max nTPM: 109.2
Min nTPM: 41.4
RHH5232_R3604
52.8
RHH5204_R3575
109.2
RHH5261_R3633
41.4
RHH5296_R3662
70.5
Vd2 gdTCR nTPM: 70.4
Samples: 4
Max nTPM: 89.7
Min nTPM: 49.6
RHH5234_R3606
53.7
RHH5206_R3577
88.4
RHH5263_R3635
49.6
RHH5298_R3664
89.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
