PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:470.8 nTPM
FANTOM5:255.9 Scaled Tags Per Million
Pig:152.8 nTPM
Mouse:24.2 nTPM
Allen mouse:11.9 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 470.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 32.2
1984 Male, age 76, both hemispheres 61.9
2188 Female, age 91, both hemispheres 26.0
2301 Female, age 85, both hemispheres 24.4
2090 Male, age 80, both hemispheres 16.4
Area postrema
nTPM: 112.5
2054 Male, age 76, both hemispheres 313.0
2799 Male, age 61, both hemispheres 14.9
2306 Male, age 80, both hemispheres 9.6
Dorsal cochlear nucleus
nTPM: 54.4
2187 Female, age 91, both hemispheres 104.6
2058 Male, age 76, both hemispheres 104.0
2370 Male, age 61, both hemispheres 45.3
2802 Male, age 74, right hemisphere 13.2
2378 Male, age 80, both hemispheres 5.1
Dorsal medullary reticular nucleus
nTPM: 174.5
2040 Female, age 85, both hemispheres 265.5
2088 Male, age 76, both hemispheres 148.0
2373 Male, age 61, both hemispheres 110.1
Dorsal motor vagal complex
nTPM: 265.2
2133 Female, age 91, both hemispheres 493.9
2807 Female, age 85, both hemispheres 449.2
2844 Male, age 55, unknown 323.2
2813 Female, age 72, unknown 237.5
2643 Male, age 74, both hemispheres 222.1
2797 Male, age 61, both hemispheres 165.4
2000 Male, age 74, unknown 125.9
2185 Male, age 76, both hemispheres 104.4
Dorsal tegmental nucleus
nTPM: 93.1
2083 Male, age 80, both hemispheres 157.4
2358 Male, age 61, both hemispheres 96.6
2326 Male, age 74, both hemispheres 68.4
1936 Male, age 76, left hemisphere 50.2
Dorsolateral tegmental area
nTPM: 83.3
2654 Male, age 80, both hemispheres 116.9
2360 Male, age 74, both hemispheres 103.5
2141 Male, age 76, both hemispheres 83.5
2337 Male, age 61, both hemispheres 66.8
2751 Female, age 85, both hemispheres 46.0
Gigantocellular reticular nuclei, medullary
nTPM: 47.5
2310 Male, age 80, both hemispheres 103.7
1876 Female, age 85, both hemispheres 101.2
2387 Female, age 91, both hemispheres 26.0
2022 Male, age 76, right hemisphere 23.3
2462 Male, age 74, both hemispheres 20.0
2314 Male, age 61, both hemispheres 10.5
Gigantocellular reticular nuclei, pars
nTPM: 49.7
2084 Female, age 85, both hemispheres 144.0
2336 Male, age 61, both hemispheres 79.4
2168 Male, age 76, both hemispheres 17.2
2330 Male, age 80, both hemispheres 4.0
2706 Male, age 80, both hemispheres 3.9
Inferior olive
nTPM: 16.7
2085 Female, age 85, both hemispheres 42.6
2178 Male, age 61, both hemispheres 21.6
2563 Male, age 74, both hemispheres 9.2
2628 Female, age 91, both hemispheres 7.2
2379 Male, age 80, both hemispheres 3.1
Kolliker-Fuse nucleus
nTPM: 49.1
2163 Male, age 80, both hemispheres 98.7
2315 Male, age 76, right hemisphere 38.2
2793 Female, age 91, left hemisphere 10.4
Lateral lemniscal nuclei
nTPM: 9.1
2453 Male, age 74, right hemisphere 15.9
2320 Female, age 91, left hemisphere 12.6
2169 Male, age 76, both hemispheres 8.9
2746 Female, age 85, left hemisphere 4.3
2036 Male, age 80, both hemispheres 4.0
Lateral medullary reticular nucleus
nTPM: 76.5
2190 Female, age 85, both hemispheres 207.0
2044 Male, age 76, both hemispheres 130.6
2852 Male, age 80, both hemispheres 75.0
2374 Male, age 61, both hemispheres 17.8
2305 Male, age 74, both hemispheres 16.1
2804 Female, age 91, both hemispheres 12.4
Lateral parabrachial nucleus
nTPM: 61.3
2790 Male, age 61, both hemispheres 139.9
2013 Male, age 80, both hemispheres 84.7
2792 Male, age 76, both hemispheres 12.6
2139 Female, age 85, right hemisphere 8.2
Lateral vestibular nucleus
nTPM: 76.1
2184 Male, age 76, both hemispheres 90.9
2311 Male, age 80, both hemispheres 61.3
Locus coeruleus
nTPM: 344.5
2123 Female, age 91, both hemispheres 691.1
2720 Male, age 74, both hemispheres 501.8
1980 Male, age 76, both hemispheres 427.9
2162 Male, age 80, both hemispheres 414.4
2014 Male, age 55, unknown 141.5
2788 Male, age 74, unknown 128.1
2317 Female, age 72, unknown 106.7
Medial olivary nucleus
nTPM: 21.8
1962 Male, age 76, both hemispheres 43.0
2851 Male, age 80, both hemispheres 36.1
1943 Male, age 61, both hemispheres 7.4
2138 Female, age 91, both hemispheres 0.7
Medial parabrachial nucleus
nTPM: 96.8
2170 Female, age 91, both hemispheres 145.8
2786 Male, age 76, both hemispheres 127.9
2156 Male, age 61, both hemispheres 93.9
2854 Male, age 80, both hemispheres 87.5
2463 Female, age 85, right hemisphere 28.8
Medial periolivary nuclei
nTPM: 9.8
2458 Female, age 91, both hemispheres 19.2
2063 Male, age 76, both hemispheres 15.6
2081 Male, age 80, both hemispheres 5.5
2791 Male, age 74, right hemisphere 4.9
2171 Female, age 85, both hemispheres 3.7
Medial vestibular nucleus
nTPM: 83.3
2134 Male, age 76, both hemispheres 162.3
2743 Female, age 85, both hemispheres 134.2
2801 Male, age 74, both hemispheres 86.4
2624 Male, age 61, both hemispheres 52.0
2803 Female, age 91, both hemispheres 37.6
2093 Male, age 80, both hemispheres 27.2
Motor facial nucleus
nTPM: 31.3
2126 Male, age 61, both hemispheres 134.1
2062 Male, age 76, both hemispheres 27.3
2795 Female, age 91, both hemispheres 9.3
2365 Male, age 74, right hemisphere 6.2
2697 Female, age 85, both hemispheres 5.8
2327 Male, age 80, both hemispheres 5.0
Motor hypoglossal nucleus
nTPM: 318.1
2461 Male, age 61, both hemispheres 396.1
2277 Male, age 76, both hemispheres 395.6
2182 Male, age 80, both hemispheres 394.6
2132 Female, age 85, both hemispheres 346.5
2125 Female, age 91, both hemispheres 57.8
Motor trigeminal nucleus
nTPM: 45.3
2335 Male, age 61, both hemispheres 96.6
2309 Male, age 76, both hemispheres 89.3
2321 Female, age 91, both hemispheres 24.4
2560 Male, age 74, both hemispheres 12.6
2079 Male, age 80, both hemispheres 3.8
Nuclei of the trapezoid body
nTPM: 8.4
1983 Male, age 76, both hemispheres 11.8
2368 Female, age 91, both hemispheres 9.8
2166 Male, age 80, both hemispheres 8.5
2735 Female, age 85, both hemispheres 7.1
2159 Male, age 61, both hemispheres 4.8
Nucleus ambiguus
nTPM: 382.5
2096 Female, age 85, both hemispheres 737.5
2071 Male, age 76, both hemispheres 27.5
Nucleus cuneatus
nTPM: 66.5
2562 Male, age 61, both hemispheres 313.2
2131 Male, age 76, both hemispheres 111.1
2376 Male, age 61, both hemispheres 38.6
2808 Female, age 85, both hemispheres 36.5
2381 Male, age 80, both hemispheres 28.6
2100 Male, age 76, both hemispheres 25.8
2564 Male, age 74, both hemispheres 24.9
2805 Female, age 91, both hemispheres 10.5
2380 Male, age 80, both hemispheres 9.4
Nucleus gracilis
nTPM: 36.4
2299 Female, age 85, both hemispheres 53.2
2382 Male, age 80, both hemispheres 42.2
2627 Male, age 74, both hemispheres 13.9
Nucleus raphe magnus
nTPM: 14.5
2459 Female, age 91, both hemispheres 24.0
2455 Male, age 74, both hemispheres 21.4
2051 Male, age 76, both hemispheres 19.5
2160 Male, age 61, both hemispheres 8.8
2328 Male, age 80, both hemispheres 7.3
2172 Female, age 85, both hemispheres 6.3
Nucleus raphe obscurus
nTPM: 27.7
2845 Female, age 85, midline 30.4
2800 Male, age 61, midline 30.3
2142 Male, age 76, midline 22.3
Nucleus raphe pallidus
nTPM: 68.2
2183 Male, age 80, midline 165.9
2145 Male, age 76, midline 25.3
1924 Male, age 61, midline 13.5
Nucleus tractus solitarii
nTPM: 470.8
2307 Male, age 80, both hemispheres 1044.2
2191 Female, age 85, both hemispheres 448.1
2656 Male, age 76, both hemispheres 366.2
2144 Female, age 91, right hemisphere 24.6
Paramedian reticular nucleus
nTPM: 130.8
2313 Male, age 61, both hemispheres 216.1
2057 Male, age 80, both hemispheres 172.3
2052 Male, age 76, both hemispheres 75.3
2050 Female, age 85, both hemispheres 59.3
Parvicellular reticular nuclei
nTPM: 97.5
2119 Male, age 80, both hemispheres 260.0
2095 Male, age 76, both hemispheres 26.2
2558 Male, age 74, both hemispheres 6.4
Parvicellular reticular nuclei, medullary
nTPM: 185.9
2091 Female, age 85, both hemispheres 340.0
2189 Female, age 91, both hemispheres 181.2
2181 Male, age 80, left hemisphere 36.5
Pedunculopontine tegmental nucleus
nTPM: 167.1
2334 Male, age 80, both hemispheres 365.7
2338 Male, age 61, both hemispheres 73.8
1921 Female, age 85, both hemispheres 61.6
Peritrigeminal nucleus
nTPM: 153.5
2067 Female, age 85, both hemispheres 272.3
2179 Male, age 61, both hemispheres 120.7
2136 Male, age 76, both hemispheres 67.4
Pontine nuclei
nTPM: 21.4
2109 Female, age 72, unknown 51.5
2454 Male, age 74, left hemisphere 48.1
1863 Male, age 55, unknown 34.4
2727 Male, age 61, right hemisphere 10.8
1968 Male, age 76, left hemisphere 10.0
2319 Female, age 91, both hemispheres 7.6
2115 Male, age 80, left hemisphere 5.2
2787 Female, age 85, both hemispheres 3.8
Pontine raphe nucleus
nTPM: 73.1
2853 Male, age 76, midline 114.4
2122 Female, age 85, midline 31.8
Posteroventral cochlear nucleus
nTPM: 74.6
2070 Male, age 76, both hemispheres 173.8
2752 Female, age 85, both hemispheres 120.8
2371 Male, age 61, both hemispheres 68.0
2341 Male, age 80, both hemispheres 9.9
2135 Female, age 91, both hemispheres 0.7
Prepositus hypoglossal nucleus
nTPM: 37.8
2855 Female, age 85, right hemisphere 45.5
2086 Male, age 80, both hemispheres 30.1
Principal sensory trigeminal nucleus
nTPM: 29.7
2324 Male, age 76, both hemispheres 88.6
2158 Male, age 61, both hemispheres 15.1
2367 Female, age 91, left hemisphere 10.4
2008 Male, age 80, left hemisphere 4.8
Reticular pontine nucleus, caudal
nTPM: 23.1
2559 Male, age 74, both hemispheres 41.9
2457 Female, age 91, both hemispheres 24.2
2092 Male, age 76, both hemispheres 16.2
2332 Male, age 80, right hemisphere 9.9
Reticular pontine nucleus, oral
nTPM: 41.5
1939 Male, age 80, both hemispheres 90.0
2167 Male, age 76, both hemispheres 71.5
2012 Female, age 85, both hemispheres 22.4
2361 Male, age 74, both hemispheres 16.5
2366 Female, age 91, both hemispheres 6.9
Reticulotegmental nucleus
nTPM: 50.7
2322 Female, age 91, both hemispheres 60.0
2452 Male, age 74, both hemispheres 53.7
2333 Male, age 80, both hemispheres 45.0
2325 Male, age 76, both hemispheres 44.3
Spinal trigeminal nucleus, caudal
nTPM: 104.7
2308 Male, age 80, both hemispheres 162.5
2390 Female, age 91, both hemispheres 134.4
2447 Male, age 76, both hemispheres 105.9
2642 Male, age 74, both hemispheres 78.9
2312 Male, age 61, both hemispheres 41.7
Spinal trigeminal nucleus, interpolar
nTPM: 167.5
2033 Male, age 80, both hemispheres 340.7
2386 Female, age 85, both hemispheres 194.8
2066 Male, age 76, right hemisphere 175.6
2625 Male, age 61, both hemispheres 80.3
2389 Female, age 91, both hemispheres 46.4
Spinal trigeminal nucleus, oral
nTPM: 113.7
2164 Male, age 80, both hemispheres 149.4
2737 Female, age 85, both hemispheres 122.5
1978 Male, age 76, both hemispheres 69.1
Spinal vestibular nucleus
nTPM: 93.6
2780 Male, age 80, both hemispheres 151.2
2186 Female, age 91, both hemispheres 106.0
2748 Male, age 76, both hemispheres 89.8
2806 Female, age 85, both hemispheres 89.0
2384 Male, age 74, both hemispheres 84.5
2796 Male, age 61, both hemispheres 41.2
Subcoeruleus area
nTPM: 181.0
2323 Female, age 91, left hemisphere 474.9
2451 Male, age 74, both hemispheres 269.4
1958 Male, age 80, both hemispheres 113.4
2369 Female, age 85, left hemisphere 31.3
2089 Male, age 76, left hemisphere 16.1
Superior olive
nTPM: 9.1
2561 Female, age 91, both hemispheres 18.5
2364 Male, age 74, right hemisphere 8.7
2329 Male, age 80, right hemisphere 8.2
1875 Female, age 85, both hemispheres 5.4
2020 Male, age 76, both hemispheres 4.6
Superior vestibular nucleus
nTPM: 80.1
2061 Male, age 76, both hemispheres 107.9
2015 Male, age 80, both hemispheres 89.1
2383 Male, age 74, both hemispheres 43.4
Ventral medullary reticular nucleus
nTPM: 134.4
2060 Male, age 76, both hemispheres 172.9
2372 Male, age 61, both hemispheres 95.9
Ventral periolivary nuclei
nTPM: 7.5
2794 Female, age 91, left hemisphere 16.0
2165 Male, age 80, both hemispheres 7.9
2130 Female, age 85, both hemispheres 4.4
2023 Male, age 76, both hemispheres 1.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 172.4
2741 Female, age 85, both hemispheres 438.9
2180 Male, age 61, both hemispheres 229.5
1986 Male, age 76, both hemispheres 118.0
2118 Male, age 80, both hemispheres 64.4
2302 Female, age 91, both hemispheres 11.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 63.8
2359 Male, age 61, both hemispheres 250.5
2840 Female, age 85, both hemispheres 75.1
2456 Female, age 91, both hemispheres 18.9
2449 Male, age 74, both hemispheres 16.6
1959 Male, age 76, both hemispheres 12.8
2161 Male, age 80, both hemispheres 9.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 255.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 255.9
FF:10165-103B3 76 years, female 344.3
FF:10182-103D2 60 years, female 167.5
Medulla oblongata
Scaled Tags Per Million: 83.5
FF:10038-101F2 18-64 years, mixed 95.7
FF:10155-103A2 76 years, female 90.9
FF:10174-103C3 60 years, female 63.9
Pons
Scaled Tags Per Million: 101.8
FF:10033-101E6 18-54 years, mixed 101.8

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 152.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 36.0
Samples: 4

Max nTPM: 51.5
Min nTPM: 23.6
Sample A Female 39.8
Sample B Female 23.6
Sample C Male 51.5
Sample D Male 29.1
Pons
nTPM: 152.9
Samples: 4

Max nTPM: 458.4
Min nTPM: 41.8
Sample A Female 458.4
Sample B Female 56.6
Sample C Male 41.8
Sample D Male 54.6

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 24.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 24.3
Samples: 4

Max nTPM: 29.6
Min nTPM: 18.1
Sample A Male 26.1
Sample B Male 23.2
Sample C Female 29.6
Sample D Female 18.1

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 11.9
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 11.1
71924165 Antisense, RP_050602_03_E11, Mouse strain C57BL/6J (56 days, male) 11.1
70299935 Antisense, RP_050602_03_E11, Mouse strain C57BL/6J (56 days, male) 10.9
Pons
Expression energy: 11.9
70299935 Antisense, RP_050602_03_E11, Mouse strain C57BL/6J (56 days, male) 11.9
71924165 Antisense, RP_050602_03_E11, Mouse strain C57BL/6J (56 days, male) 11.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org