HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:40.5 nTPM
HPA Brain:35.2 nTPM
GTEx:40.5 nTPM
FANTOM5:64.2 Scaled Tags Per Million
Pig:15.8 nTPM
Mouse:11.2 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.2
Sample id Sample description nTPM
Hippocampus
nTPM: 31.2
1911 Female, age 85, right hemisphere 35.3
1898 Male, age 80, left hemisphere 33.8
1855 Male, age 76, left hemisphere 31.4
2529 Female, age 94, left hemisphere 31.0
2621 Female, age 67, right hemisphere 29.4
2148 Female, age 91, left hemisphere 26.5
Dentate gyrus
nTPM: 30.2
1927 Female, age 91, both hemispheres 34.7
2528 Male, age 74, both hemispheres 34.7
2010 Male, age 76, both hemispheres 31.0
2246 Female, age 85, both hemispheres 30.7
2530 Female, age 94, left hemisphere 27.7
2531 Female, age 67, both hemispheres 22.7
Entorhinal gyrus
nTPM: 28.8
1938 Female, age 85, left hemisphere 32.6
1787 Male, age 76, left hemisphere 31.6
2117 Female, age 91, right hemisphere 30.9
2764 Male, age 80, right hemisphere 29.7
2613 Female, age 94, left hemisphere 25.4
2686 Male, age 75, right hemisphere 22.4
Hippocampus, CA1
nTPM: 30.7
2527 Male, age 74, both hemispheres 35.0
1873 Female, age 85, both hemispheres 31.8
2749 Male, age 80, left hemisphere 29.8
2045 Male, age 76, both hemispheres 29.1
2082 Female, age 91, right hemisphere 27.7
Hippocampus, CA2
nTPM: 31.6
1963 Male, age 80, left hemisphere 34.3
2249 Male, age 74, both hemispheres 34.2
2113 Female, age 91, right hemisphere 32.9
1940 Female, age 85, left hemisphere 30.4
1892 Male, age 76, both hemispheres 30.0
2437 Female, age 94, left hemisphere 27.8
Hippocampus, CA3
nTPM: 30.7
2436 Male, age 74, both hemispheres 38.0
1891 Female, age 85, both hemispheres 35.3
1867 Male, age 76, both hemispheres 32.4
2137 Male, age 80, left hemisphere 29.6
2620 Female, age 94, left hemisphere 26.9
2861 Female, age 67, both hemispheres 22.2
Parahippocampal cortex
nTPM: 32.1
1850 Male, age 80, both hemispheres 36.0
1933 Female, age 85, both hemispheres 35.1
1990 Female, age 91, right hemisphere 34.7
2693 Female, age 94, both hemispheres 34.0
2250 Female, age 67, right hemisphere 32.9
2018 Male, age 76, both hemispheres 32.8
2532 Female, age 72, left hemisphere 32.7
2692 Male, age 74, both hemispheres 29.4
2245 Female, age 91, both hemispheres 27.1
2622 Female, age 67, right hemisphere 25.8
Perirhinal gyrus
nTPM: 35.2
1841 Female, age 85, right hemisphere 36.8
1847 Female, age 91, left hemisphere 36.0
1794 Male, age 80, right hemisphere 35.4
2521 Female, age 94, right hemisphere 35.2
2848 Male, age 76, right hemisphere 32.7
Subiculum
nTPM: 30.0
1901 Male, age 80, both hemispheres 31.8
2729 Female, age 91, right hemisphere 31.3
2619 Male, age 74, both hemispheres 31.1
1977 Female, age 85, both hemispheres 29.9
2438 Female, age 94, left hemisphere 29.8
2042 Male, age 76, both hemispheres 26.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.5
Samples: 197

Max nTPM: 57.0
Min nTPM: 20.7
Std nTPM: 6.4
Median nTPM: 40.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 57.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 55.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 54.6
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 53.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 53.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 53.7
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 53.7
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 52.8
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 52.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 51.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 51.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.2
FF:10169-103B7 60 years, female 72.7
FF:10153-102I9 76 years, female 55.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.8
Pig sample Sample description nTPM
Subiculum
nTPM: 14.7
Samples: 4

Max nTPM: 15.5
Min nTPM: 13.8
Sample A Female 15.5
Sample B Female 14.6
Sample C Male 13.8
Sample D Male 14.8
Dorsal hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 19.2
Min nTPM: 13.6
Sample A Female 19.2
Sample B Female 15.2
Sample C Male 15.3
Sample D Male 13.6
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 14.8
Min nTPM: 11.9
Sample A Female 11.9
Sample B Female 13.8
Sample C Male 14.8
Sample D Male 12.0
Ventral hippocampus
nTPM: 15.1
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.7
Sample A Female 15.6
Sample B Female 13.9
Sample C Male 13.7
Sample D Male 17.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.2
Samples: 4

Max nTPM: 12.5
Min nTPM: 9.1
Sample A Male 11.9
Sample B Male 11.3
Sample C Female 12.5
Sample D Female 9.1
Hippocampal formation
nTPM: 9.9
Samples: 4

Max nTPM: 12.4
Min nTPM: 6.9
Sample A Male 12.4
Sample B Male 9.2
Sample C Female 6.9
Sample D Female 11.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
75826638 Antisense, RP_060601_01_C06, Mouse strain C57BL/6J (56 days, male) 0.3

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