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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
46.2
nTPM
Monaco:
599.5
nTPM
Schmiedel:
235.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
46.2
HPA sample
nTPM
gdT-cell nTPM: 35.9
Samples: 6
Max nTPM: 53.6
Min nTPM: 23.4
P10809_1007
23.4
P10809_1022
31.4
P10809_1041
35.6
P10809_1060
53.6
P10809_1077
37.0
P10809_1098
34.3
MAIT T-cell nTPM: 33.8
Samples: 6
Max nTPM: 40.7
Min nTPM: 23.0
P10809_1006
23.0
P10809_1024
40.7
P10809_1043
32.5
P10809_1062
38.7
P10809_1083
40.3
P10809_1097
27.5
Memory CD4 T-cell nTPM: 39.5
Samples: 6
Max nTPM: 54.5
Min nTPM: 29.4
P10809_1014
29.4
P10809_1026
38.8
P10809_1045
32.0
P10809_1064
39.0
P10809_1086
54.5
P10809_1113
43.0
Memory CD8 T-cell nTPM: 36.5
Samples: 5
Max nTPM: 41.2
Min nTPM: 28.4
P10809_1012
28.4
P10809_1027
39.9
P10809_1046
32.6
P10809_1065
40.3
P10809_1111
41.2
Naive CD4 T-cell nTPM: 45.1
Samples: 6
Max nTPM: 52.5
Min nTPM: 34.1
P10809_1015
34.1
P10809_1030
52.5
P10809_1049
51.7
P10809_1068
45.6
P10809_1085
43.6
P10809_1112
43.3
Naive CD8 T-cell nTPM: 41.0
Samples: 6
Max nTPM: 51.2
Min nTPM: 29.6
P10809_1016
29.6
P10809_1031
42.7
P10809_1050
41.5
P10809_1069
44.5
P10809_1087
51.2
P10809_1110
36.4
T-reg nTPM: 46.2
Samples: 6
Max nTPM: 58.7
Min nTPM: 29.9
P10809_1018
29.9
P10809_1037
42.8
P10809_1056
46.6
P10809_1075
47.6
P10809_1094
58.7
P10809_1106
51.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
599.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 563.8
Samples: 4
Max nTPM: 617.1
Min nTPM: 515.5
RHH5202_R3573
617.1
RHH5230_R3602
590.8
RHH5259_R3631
531.7
RHH5288_R3660
515.5
Effector memory CD8 T-cell nTPM: 558.1
Samples: 4
Max nTPM: 646.1
Min nTPM: 503.9
RHH5203_R3574
503.9
RHH5231_R3603
546.3
RHH5260_R3632
536.0
RHH5289_R3661
646.1
MAIT T-cell nTPM: 428.4
Samples: 4
Max nTPM: 454.3
Min nTPM: 401.2
RHH5233_R3605
401.2
RHH5205_R3576
454.3
RHH5262_R3634
449.4
RHH5297_R3663
408.5
Memory CD4 T-cell TFH nTPM: 518.9
Samples: 4
Max nTPM: 576.6
Min nTPM: 441.5
RHH5300_R3666
441.5
RHH5236_R3608
550.0
RHH5265_R3637
507.4
RHH5208_R3579
576.6
Memory CD4 T-cell Th1 nTPM: 484.4
Samples: 4
Max nTPM: 510.9
Min nTPM: 457.3
RHH5210_R3581
457.3
RHH5302_R3668
469.7
RHH5238_R3610
499.5
RHH5267_R3639
510.9
Memory CD4 T-cell Th1/Th17 nTPM: 559.5
Samples: 4
Max nTPM: 611.6
Min nTPM: 466.1
RHH5303_R3669
611.6
RHH5211_R3582
561.9
RHH5239_R3611
598.3
RHH5268_R3640
466.1
Memory CD4 T-cell Th17 nTPM: 518.9
Samples: 4
Max nTPM: 576.0
Min nTPM: 479.4
RHH5304_R3670
514.5
RHH5212_R3583
505.6
RHH5240_R3612
576.0
RHH5269_R3641
479.4
Memory CD4 T-cell Th2 nTPM: 518.6
Samples: 4
Max nTPM: 547.5
Min nTPM: 483.1
RHH5305_R3671
483.1
RHH5213_R3584
512.4
RHH5241_R3613
547.5
RHH5270_R3642
531.3
Naive CD4 T-cell nTPM: 479.8
Samples: 4
Max nTPM: 530.4
Min nTPM: 445.5
RHH5306_R3672
458.9
RHH5214_R3585
445.5
RHH5242_R3614
484.2
RHH5271_R3643
530.4
Naive CD8 T-cell nTPM: 599.5
Samples: 4
Max nTPM: 699.2
Min nTPM: 450.2
RHH5201_R3572
656.7
RHH5229_R3601
699.2
RHH5258_R3630
450.2
RHH5287_R3659
591.9
Non-Vd2 gdTCR nTPM: 454.8
Samples: 4
Max nTPM: 520.3
Min nTPM: 371.7
RHH5235_R3607
415.0
RHH5264_R3636
512.1
RHH5207_R3578
520.3
RHH5299_R3665
371.7
T-reg nTPM: 497.1
Samples: 4
Max nTPM: 548.4
Min nTPM: 432.2
RHH5301_R3667
432.2
RHH5237_R3609
541.8
RHH5266_R3638
466.1
RHH5209_R3580
548.4
Terminal effector memory CD4 T-cell nTPM: 478.2
Samples: 2
Max nTPM: 488.8
Min nTPM: 467.6
RHH5243_R3615
488.8
RHH5272_R3644
467.6
Terminal effector memory CD8 T-cell nTPM: 492.1
Samples: 4
Max nTPM: 557.5
Min nTPM: 416.6
RHH5232_R3604
557.5
RHH5204_R3575
416.6
RHH5261_R3633
514.3
RHH5296_R3662
480.1
Vd2 gdTCR nTPM: 454.1
Samples: 4
Max nTPM: 523.1
Min nTPM: 388.1
RHH5234_R3606
388.1
RHH5206_R3577
459.4
RHH5263_R3635
523.1
RHH5298_R3664
445.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
