HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:37.4 nTPM
HPA Brain:34.5 nTPM
GTEx:37.4 nTPM
FANTOM5:34.5 Scaled Tags Per Million
Pig:12.3 nTPM
Mouse:33.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041517Antibody HPA046741
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.5
Sample id Sample description nTPM
Hippocampus
nTPM: 29.7
1911 Female, age 85, right hemisphere 34.5
2148 Female, age 91, left hemisphere 33.4
1855 Male, age 76, left hemisphere 30.4
2529 Female, age 94, left hemisphere 27.3
2621 Female, age 67, right hemisphere 26.7
1898 Male, age 80, left hemisphere 25.7
Dentate gyrus
nTPM: 30.3
2246 Female, age 85, both hemispheres 34.7
1927 Female, age 91, both hemispheres 33.7
2528 Male, age 74, both hemispheres 30.7
2531 Female, age 67, both hemispheres 29.9
2010 Male, age 76, both hemispheres 28.1
2530 Female, age 94, left hemisphere 24.8
Entorhinal gyrus
nTPM: 30.4
1938 Female, age 85, left hemisphere 33.4
2613 Female, age 94, left hemisphere 33.2
2117 Female, age 91, right hemisphere 30.7
2764 Male, age 80, right hemisphere 29.3
2686 Male, age 75, right hemisphere 28.3
1787 Male, age 76, left hemisphere 27.9
Hippocampus, CA1
nTPM: 32.4
2082 Female, age 91, right hemisphere 35.4
1873 Female, age 85, both hemispheres 32.6
2045 Male, age 76, both hemispheres 32.5
2749 Male, age 80, left hemisphere 32.4
2527 Male, age 74, both hemispheres 29.1
Hippocampus, CA2
nTPM: 31.0
2113 Female, age 91, right hemisphere 34.9
2249 Male, age 74, both hemispheres 33.9
1892 Male, age 76, both hemispheres 30.7
1940 Female, age 85, left hemisphere 30.1
1963 Male, age 80, left hemisphere 28.5
2437 Female, age 94, left hemisphere 28.0
Hippocampus, CA3
nTPM: 32.4
2137 Male, age 80, left hemisphere 39.6
1891 Female, age 85, both hemispheres 34.7
2620 Female, age 94, left hemisphere 34.0
2436 Male, age 74, both hemispheres 31.1
1867 Male, age 76, both hemispheres 30.0
2861 Female, age 67, both hemispheres 25.1
Parahippocampal cortex
nTPM: 33.0
2693 Female, age 94, both hemispheres 40.9
2532 Female, age 72, left hemisphere 35.3
1850 Male, age 80, both hemispheres 33.8
1933 Female, age 85, both hemispheres 33.5
1990 Female, age 91, right hemisphere 32.7
2692 Male, age 74, both hemispheres 32.0
2245 Female, age 91, both hemispheres 31.7
2250 Female, age 67, right hemisphere 31.5
2622 Female, age 67, right hemisphere 30.9
2018 Male, age 76, both hemispheres 27.9
Perirhinal gyrus
nTPM: 34.5
2848 Male, age 76, right hemisphere 37.3
1841 Female, age 85, right hemisphere 36.7
2521 Female, age 94, right hemisphere 35.1
1794 Male, age 80, right hemisphere 32.5
1847 Female, age 91, left hemisphere 30.8
Subiculum
nTPM: 30.2
2438 Female, age 94, left hemisphere 31.9
1977 Female, age 85, both hemispheres 31.4
2729 Female, age 91, right hemisphere 31.4
1901 Male, age 80, both hemispheres 31.1
2619 Male, age 74, both hemispheres 29.3
2042 Male, age 76, both hemispheres 25.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.4
Samples: 197

Max nTPM: 83.7
Min nTPM: 23.9
Std nTPM: 6.8
Median nTPM: 36.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 83.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 58.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 56.3
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 52.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 51.3
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 49.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 49.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 48.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 47.4
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 47.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 47.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.5
FF:10169-103B7 60 years, female 37.3
FF:10153-102I9 76 years, female 31.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.3
Pig sample Sample description nTPM
Subiculum
nTPM: 9.1
Samples: 4

Max nTPM: 10.4
Min nTPM: 8.0
Sample A Female 10.4
Sample B Female 8.6
Sample C Male 8.0
Sample D Male 9.2
Dorsal hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 15.0
Min nTPM: 10.0
Sample A Female 15.0
Sample B Female 12.7
Sample C Male 10.0
Sample D Male 11.3
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 10.1
Min nTPM: 7.1
Sample A Female 10.1
Sample B Female 9.4
Sample C Male 9.5
Sample D Male 7.1
Ventral hippocampus
nTPM: 10.2
Samples: 4

Max nTPM: 12.5
Min nTPM: 8.5
Sample A Female 12.5
Sample B Female 9.3
Sample C Male 8.5
Sample D Male 10.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.8
Samples: 4

Max nTPM: 34.6
Min nTPM: 32.7
Sample A Male 32.7
Sample B Male 34.6
Sample C Female 33.9
Sample D Female 34.0
Hippocampal formation
nTPM: 32.5
Samples: 4

Max nTPM: 33.6
Min nTPM: 31.7
Sample A Male 32.4
Sample B Male 33.6
Sample C Female 31.7
Sample D Female 32.2

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