HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:34.7 nTPM
HPA Brain:185.5 nTPM
GTEx:34.7 nTPM
FANTOM5:199.9 Scaled Tags Per Million
Pig:196.0 nTPM
Mouse:118.9 nTPM
Allen mouse:19.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041365
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 185.5
Sample id Sample description nTPM
Hippocampus
nTPM: 135.7
1898 Male, age 80, left hemisphere 166.8
2529 Female, age 94, left hemisphere 139.1
2621 Female, age 67, right hemisphere 134.4
2148 Female, age 91, left hemisphere 132.8
1855 Male, age 76, left hemisphere 127.7
1911 Female, age 85, right hemisphere 113.4
Dentate gyrus
nTPM: 127.2
1927 Female, age 91, both hemispheres 156.2
2246 Female, age 85, both hemispheres 131.5
2010 Male, age 76, both hemispheres 126.5
2530 Female, age 94, left hemisphere 118.0
2528 Male, age 74, both hemispheres 116.9
2531 Female, age 67, both hemispheres 113.9
Entorhinal gyrus
nTPM: 146.9
1938 Female, age 85, left hemisphere 177.0
1787 Male, age 76, left hemisphere 152.7
2764 Male, age 80, right hemisphere 151.3
2686 Male, age 75, right hemisphere 139.9
2613 Female, age 94, left hemisphere 131.3
2117 Female, age 91, right hemisphere 129.1
Hippocampus, CA1
nTPM: 146.4
2749 Male, age 80, left hemisphere 213.4
1873 Female, age 85, both hemispheres 154.4
2527 Male, age 74, both hemispheres 140.0
2082 Female, age 91, right hemisphere 115.1
2045 Male, age 76, both hemispheres 109.4
Hippocampus, CA2
nTPM: 141.4
1892 Male, age 76, both hemispheres 173.6
1963 Male, age 80, left hemisphere 163.4
2437 Female, age 94, left hemisphere 138.4
1940 Female, age 85, left hemisphere 130.2
2113 Female, age 91, right hemisphere 126.3
2249 Male, age 74, both hemispheres 116.7
Hippocampus, CA3
nTPM: 136.6
2137 Male, age 80, left hemisphere 191.2
1867 Male, age 76, both hemispheres 146.6
1891 Female, age 85, both hemispheres 127.4
2620 Female, age 94, left hemisphere 120.6
2861 Female, age 67, both hemispheres 120.6
2436 Male, age 74, both hemispheres 113.3
Parahippocampal cortex
nTPM: 158.3
1850 Male, age 80, both hemispheres 189.6
1933 Female, age 85, both hemispheres 175.9
2250 Female, age 67, right hemisphere 171.7
2245 Female, age 91, both hemispheres 169.4
1990 Female, age 91, right hemisphere 164.3
2693 Female, age 94, both hemispheres 161.6
2532 Female, age 72, left hemisphere 147.7
2692 Male, age 74, both hemispheres 143.1
2622 Female, age 67, right hemisphere 137.9
2018 Male, age 76, both hemispheres 122.1
Perirhinal gyrus
nTPM: 185.5
1847 Female, age 91, left hemisphere 208.9
1841 Female, age 85, right hemisphere 205.3
1794 Male, age 80, right hemisphere 188.4
2521 Female, age 94, right hemisphere 165.0
2848 Male, age 76, right hemisphere 160.1
Subiculum
nTPM: 132.7
2438 Female, age 94, left hemisphere 155.9
1977 Female, age 85, both hemispheres 153.5
1901 Male, age 80, both hemispheres 141.5
2619 Male, age 74, both hemispheres 126.8
2729 Female, age 91, right hemisphere 121.6
2042 Male, age 76, both hemispheres 96.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.7
Samples: 197

Max nTPM: 80.3
Min nTPM: 6.7
Std nTPM: 12.1
Median nTPM: 32.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 80.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 75.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 74.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 73.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 71.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 70.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 66.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 64.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 63.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 58.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 56.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 199.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 199.9
FF:10169-103B7 60 years, female 220.1
FF:10153-102I9 76 years, female 179.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 196.0
Pig sample Sample description nTPM
Subiculum
nTPM: 150.0
Samples: 4

Max nTPM: 176.1
Min nTPM: 131.1
Sample A Female 176.1
Sample B Female 131.1
Sample C Male 146.2
Sample D Male 146.5
Dorsal hippocampus
nTPM: 135.5
Samples: 4

Max nTPM: 162.5
Min nTPM: 119.0
Sample A Female 135.6
Sample B Female 124.9
Sample C Male 162.5
Sample D Male 119.0
Entorhinal cortex
nTPM: 196.0
Samples: 4

Max nTPM: 207.4
Min nTPM: 184.3
Sample A Female 184.3
Sample B Female 207.4
Sample C Male 190.6
Sample D Male 201.6
Ventral hippocampus
nTPM: 126.1
Samples: 4

Max nTPM: 141.6
Min nTPM: 103.2
Sample A Female 126.3
Sample B Female 103.2
Sample C Male 141.6
Sample D Male 133.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 118.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 118.9
Samples: 4

Max nTPM: 141.7
Min nTPM: 105.9
Sample A Male 114.6
Sample B Male 105.9
Sample C Female 113.3
Sample D Female 141.7
Hippocampal formation
nTPM: 109.3
Samples: 4

Max nTPM: 122.5
Min nTPM: 96.4
Sample A Male 101.4
Sample B Male 116.9
Sample C Female 122.5
Sample D Female 96.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.5
69116685 Antisense, RP_050317_02_H11, Mouse strain C57BL/6J (56 days, male) 19.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org