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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
97.8
nTPM
Monaco:
65.6
nTPM
Schmiedel:
62.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
97.8
HPA sample
nTPM
gdT-cell nTPM: 53.0
Samples: 6
Max nTPM: 64.9
Min nTPM: 44.2
P10809_1007
64.9
P10809_1022
49.5
P10809_1041
48.2
P10809_1060
44.2
P10809_1077
56.5
P10809_1098
54.7
MAIT T-cell nTPM: 68.9
Samples: 6
Max nTPM: 84.5
Min nTPM: 50.0
P10809_1006
68.6
P10809_1024
53.3
P10809_1043
73.8
P10809_1062
50.0
P10809_1083
83.0
P10809_1097
84.5
Memory CD4 T-cell nTPM: 95.0
Samples: 6
Max nTPM: 135.3
Min nTPM: 61.4
P10809_1014
114.1
P10809_1026
93.4
P10809_1045
135.3
P10809_1064
97.6
P10809_1086
67.9
P10809_1113
61.4
Memory CD8 T-cell nTPM: 84.7
Samples: 5
Max nTPM: 124.0
Min nTPM: 63.1
P10809_1012
88.9
P10809_1027
63.1
P10809_1046
124.0
P10809_1065
71.0
P10809_1111
76.3
Naive CD4 T-cell nTPM: 97.8
Samples: 6
Max nTPM: 174.8
Min nTPM: 54.4
P10809_1015
92.2
P10809_1030
102.6
P10809_1049
174.8
P10809_1068
70.9
P10809_1085
91.9
P10809_1112
54.4
Naive CD8 T-cell nTPM: 64.6
Samples: 6
Max nTPM: 75.0
Min nTPM: 47.6
P10809_1016
58.1
P10809_1031
75.0
P10809_1050
68.2
P10809_1069
74.0
P10809_1087
47.6
P10809_1110
64.5
T-reg nTPM: 94.5
Samples: 6
Max nTPM: 152.4
Min nTPM: 70.2
P10809_1018
88.0
P10809_1037
103.7
P10809_1056
152.4
P10809_1075
70.2
P10809_1094
70.3
P10809_1106
82.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
65.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 42.3
Samples: 4
Max nTPM: 66.7
Min nTPM: 21.0
RHH5202_R3573
36.7
RHH5230_R3602
44.9
RHH5259_R3631
21.0
RHH5288_R3660
66.7
Effector memory CD8 T-cell nTPM: 52.0
Samples: 4
Max nTPM: 73.1
Min nTPM: 26.3
RHH5203_R3574
66.0
RHH5231_R3603
73.1
RHH5260_R3632
42.5
RHH5289_R3661
26.3
MAIT T-cell nTPM: 41.9
Samples: 4
Max nTPM: 49.2
Min nTPM: 35.7
RHH5233_R3605
39.5
RHH5205_R3576
35.7
RHH5262_R3634
49.2
RHH5297_R3663
43.1
Memory CD4 T-cell TFH nTPM: 65.1
Samples: 4
Max nTPM: 94.3
Min nTPM: 35.2
RHH5300_R3666
81.1
RHH5236_R3608
94.3
RHH5265_R3637
49.8
RHH5208_R3579
35.2
Memory CD4 T-cell Th1 nTPM: 56.8
Samples: 4
Max nTPM: 62.1
Min nTPM: 50.6
RHH5210_R3581
50.6
RHH5302_R3668
62.1
RHH5238_R3610
55.0
RHH5267_R3639
59.5
Memory CD4 T-cell Th1/Th17 nTPM: 57.2
Samples: 4
Max nTPM: 80.7
Min nTPM: 25.8
RHH5303_R3669
58.7
RHH5211_R3582
80.7
RHH5239_R3611
25.8
RHH5268_R3640
63.5
Memory CD4 T-cell Th17 nTPM: 54.7
Samples: 4
Max nTPM: 89.8
Min nTPM: 33.9
RHH5304_R3670
39.3
RHH5212_R3583
89.8
RHH5240_R3612
33.9
RHH5269_R3641
55.8
Memory CD4 T-cell Th2 nTPM: 65.6
Samples: 4
Max nTPM: 93.5
Min nTPM: 48.3
RHH5305_R3671
48.3
RHH5213_R3584
93.5
RHH5241_R3613
69.7
RHH5270_R3642
51.0
Naive CD4 T-cell nTPM: 55.8
Samples: 4
Max nTPM: 78.7
Min nTPM: 34.3
RHH5306_R3672
73.9
RHH5214_R3585
78.7
RHH5242_R3614
36.4
RHH5271_R3643
34.3
Naive CD8 T-cell nTPM: 39.5
Samples: 4
Max nTPM: 51.8
Min nTPM: 25.5
RHH5201_R3572
25.5
RHH5229_R3601
41.3
RHH5258_R3630
39.3
RHH5287_R3659
51.8
Non-Vd2 gdTCR nTPM: 39.8
Samples: 4
Max nTPM: 59.0
Min nTPM: 25.3
RHH5235_R3607
36.0
RHH5264_R3636
38.8
RHH5207_R3578
25.3
RHH5299_R3665
59.0
T-reg nTPM: 56.7
Samples: 4
Max nTPM: 75.8
Min nTPM: 39.9
RHH5301_R3667
69.5
RHH5237_R3609
75.8
RHH5266_R3638
39.9
RHH5209_R3580
41.7
Terminal effector memory CD4 T-cell nTPM: 39.2
Samples: 2
Max nTPM: 41.3
Min nTPM: 37.1
RHH5243_R3615
41.3
RHH5272_R3644
37.1
Terminal effector memory CD8 T-cell nTPM: 46.0
Samples: 4
Max nTPM: 60.8
Min nTPM: 37.3
RHH5232_R3604
46.0
RHH5204_R3575
39.8
RHH5261_R3633
60.8
RHH5296_R3662
37.3
Vd2 gdTCR nTPM: 49.8
Samples: 4
Max nTPM: 68.1
Min nTPM: 30.7
RHH5234_R3606
45.7
RHH5206_R3577
54.8
RHH5263_R3635
30.7
RHH5298_R3664
68.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
