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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
80.4
nTPM
Monaco:
123.9
nTPM
Schmiedel:
138.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
80.4
HPA sample
nTPM
gdT-cell nTPM: 47.9
Samples: 6
Max nTPM: 56.0
Min nTPM: 33.3
P10809_1007
33.3
P10809_1022
47.0
P10809_1041
56.0
P10809_1060
46.4
P10809_1077
53.4
P10809_1098
51.1
MAIT T-cell nTPM: 47.6
Samples: 6
Max nTPM: 64.2
Min nTPM: 29.1
P10809_1006
29.1
P10809_1024
64.2
P10809_1043
53.1
P10809_1062
36.1
P10809_1083
51.5
P10809_1097
51.3
Memory CD4 T-cell nTPM: 50.2
Samples: 6
Max nTPM: 64.6
Min nTPM: 30.8
P10809_1014
30.8
P10809_1026
52.4
P10809_1045
48.8
P10809_1064
58.8
P10809_1086
64.6
P10809_1113
45.8
Memory CD8 T-cell nTPM: 57.4
Samples: 5
Max nTPM: 80.3
Min nTPM: 32.4
P10809_1012
32.4
P10809_1027
66.1
P10809_1046
55.3
P10809_1065
80.3
P10809_1111
53.0
Naive CD4 T-cell nTPM: 48.1
Samples: 6
Max nTPM: 64.0
Min nTPM: 27.8
P10809_1015
27.8
P10809_1030
45.7
P10809_1049
61.9
P10809_1068
49.4
P10809_1085
64.0
P10809_1112
39.7
Naive CD8 T-cell nTPM: 53.3
Samples: 6
Max nTPM: 70.7
Min nTPM: 23.3
P10809_1016
23.3
P10809_1031
67.5
P10809_1050
56.8
P10809_1069
59.6
P10809_1087
70.7
P10809_1110
41.6
T-reg nTPM: 80.4
Samples: 6
Max nTPM: 129.1
Min nTPM: 46.2
P10809_1018
46.2
P10809_1037
97.8
P10809_1056
129.1
P10809_1075
68.3
P10809_1094
65.8
P10809_1106
75.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
123.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 77.4
Samples: 4
Max nTPM: 81.7
Min nTPM: 73.4
RHH5202_R3573
73.4
RHH5230_R3602
81.7
RHH5259_R3631
79.1
RHH5288_R3660
75.5
Effector memory CD8 T-cell nTPM: 90.2
Samples: 4
Max nTPM: 99.0
Min nTPM: 80.6
RHH5203_R3574
88.1
RHH5231_R3603
80.6
RHH5260_R3632
99.0
RHH5289_R3661
92.9
MAIT T-cell nTPM: 107.0
Samples: 4
Max nTPM: 123.5
Min nTPM: 92.0
RHH5233_R3605
123.5
RHH5205_R3576
101.9
RHH5262_R3634
92.0
RHH5297_R3663
110.7
Memory CD4 T-cell TFH nTPM: 88.5
Samples: 4
Max nTPM: 95.0
Min nTPM: 82.3
RHH5300_R3666
82.3
RHH5236_R3608
95.0
RHH5265_R3637
90.5
RHH5208_R3579
86.0
Memory CD4 T-cell Th1 nTPM: 83.8
Samples: 4
Max nTPM: 91.3
Min nTPM: 69.7
RHH5210_R3581
69.7
RHH5302_R3668
91.3
RHH5238_R3610
89.5
RHH5267_R3639
84.7
Memory CD4 T-cell Th1/Th17 nTPM: 89.5
Samples: 4
Max nTPM: 96.3
Min nTPM: 83.1
RHH5303_R3669
85.7
RHH5211_R3582
96.3
RHH5239_R3611
93.0
RHH5268_R3640
83.1
Memory CD4 T-cell Th17 nTPM: 97.9
Samples: 4
Max nTPM: 111.3
Min nTPM: 78.1
RHH5304_R3670
78.1
RHH5212_R3583
98.1
RHH5240_R3612
104.1
RHH5269_R3641
111.3
Memory CD4 T-cell Th2 nTPM: 87.4
Samples: 4
Max nTPM: 112.5
Min nTPM: 68.0
RHH5305_R3671
68.0
RHH5213_R3584
112.5
RHH5241_R3613
90.5
RHH5270_R3642
78.4
Naive CD4 T-cell nTPM: 76.7
Samples: 4
Max nTPM: 90.5
Min nTPM: 63.1
RHH5306_R3672
79.6
RHH5214_R3585
90.5
RHH5242_R3614
73.5
RHH5271_R3643
63.1
Naive CD8 T-cell nTPM: 73.5
Samples: 4
Max nTPM: 84.3
Min nTPM: 55.7
RHH5201_R3572
75.0
RHH5229_R3601
78.8
RHH5258_R3630
55.7
RHH5287_R3659
84.3
Non-Vd2 gdTCR nTPM: 123.9
Samples: 4
Max nTPM: 141.3
Min nTPM: 109.8
RHH5235_R3607
109.8
RHH5264_R3636
110.8
RHH5207_R3578
141.3
RHH5299_R3665
133.7
T-reg nTPM: 97.6
Samples: 4
Max nTPM: 113.3
Min nTPM: 87.9
RHH5301_R3667
88.5
RHH5237_R3609
113.3
RHH5266_R3638
100.7
RHH5209_R3580
87.9
Terminal effector memory CD4 T-cell nTPM: 115.5
Samples: 2
Max nTPM: 119.5
Min nTPM: 111.5
RHH5243_R3615
111.5
RHH5272_R3644
119.5
Terminal effector memory CD8 T-cell nTPM: 121.8
Samples: 4
Max nTPM: 181.7
Min nTPM: 99.2
RHH5232_R3604
181.7
RHH5204_R3575
99.2
RHH5261_R3633
104.9
RHH5296_R3662
101.3
Vd2 gdTCR nTPM: 92.2
Samples: 4
Max nTPM: 119.0
Min nTPM: 68.4
RHH5234_R3606
80.6
RHH5206_R3577
119.0
RHH5263_R3635
100.7
RHH5298_R3664
68.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
