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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
93.9
nTPM
Monaco:
110.4
nTPM
Schmiedel:
64.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
93.9
HPA sample
nTPM
gdT-cell nTPM: 52.6
Samples: 6
Max nTPM: 61.2
Min nTPM: 44.9
P10809_1007
46.8
P10809_1022
61.2
P10809_1041
57.1
P10809_1060
44.9
P10809_1077
46.7
P10809_1098
58.7
MAIT T-cell nTPM: 69.7
Samples: 6
Max nTPM: 110.7
Min nTPM: 48.5
P10809_1006
48.5
P10809_1024
110.7
P10809_1043
50.4
P10809_1062
59.8
P10809_1083
57.2
P10809_1097
91.3
Memory CD4 T-cell nTPM: 78.6
Samples: 6
Max nTPM: 92.3
Min nTPM: 75.4
P10809_1014
76.3
P10809_1026
92.3
P10809_1045
75.8
P10809_1064
75.4
P10809_1086
76.2
P10809_1113
75.6
Memory CD8 T-cell nTPM: 69.6
Samples: 5
Max nTPM: 98.1
Min nTPM: 56.6
P10809_1012
56.6
P10809_1027
98.1
P10809_1046
61.1
P10809_1065
64.4
P10809_1111
67.7
Naive CD4 T-cell nTPM: 93.9
Samples: 6
Max nTPM: 113.1
Min nTPM: 82.8
P10809_1015
88.7
P10809_1030
108.9
P10809_1049
113.1
P10809_1068
85.4
P10809_1085
84.7
P10809_1112
82.8
Naive CD8 T-cell nTPM: 80.6
Samples: 6
Max nTPM: 108.1
Min nTPM: 56.1
P10809_1016
78.0
P10809_1031
108.1
P10809_1050
77.8
P10809_1069
81.2
P10809_1087
56.1
P10809_1110
82.3
T-reg nTPM: 72.8
Samples: 6
Max nTPM: 84.3
Min nTPM: 60.3
P10809_1018
60.3
P10809_1037
84.3
P10809_1056
69.5
P10809_1075
79.7
P10809_1094
64.8
P10809_1106
78.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
110.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 85.1
Samples: 4
Max nTPM: 107.3
Min nTPM: 63.8
RHH5202_R3573
107.3
RHH5230_R3602
66.3
RHH5259_R3631
63.8
RHH5288_R3660
103.1
Effector memory CD8 T-cell nTPM: 72.6
Samples: 4
Max nTPM: 79.3
Min nTPM: 59.8
RHH5203_R3574
72.0
RHH5231_R3603
79.1
RHH5260_R3632
59.8
RHH5289_R3661
79.3
MAIT T-cell nTPM: 82.7
Samples: 4
Max nTPM: 108.5
Min nTPM: 59.0
RHH5233_R3605
65.2
RHH5205_R3576
59.0
RHH5262_R3634
108.5
RHH5297_R3663
98.0
Memory CD4 T-cell TFH nTPM: 108.6
Samples: 4
Max nTPM: 119.8
Min nTPM: 84.8
RHH5300_R3666
84.8
RHH5236_R3608
119.1
RHH5265_R3637
119.8
RHH5208_R3579
110.7
Memory CD4 T-cell Th1 nTPM: 74.4
Samples: 4
Max nTPM: 87.5
Min nTPM: 47.5
RHH5210_R3581
84.2
RHH5302_R3668
87.5
RHH5238_R3610
47.5
RHH5267_R3639
78.4
Memory CD4 T-cell Th1/Th17 nTPM: 85.5
Samples: 4
Max nTPM: 113.9
Min nTPM: 44.8
RHH5303_R3669
113.9
RHH5211_R3582
95.9
RHH5239_R3611
44.8
RHH5268_R3640
87.3
Memory CD4 T-cell Th17 nTPM: 79.5
Samples: 4
Max nTPM: 92.8
Min nTPM: 69.7
RHH5304_R3670
80.1
RHH5212_R3583
92.8
RHH5240_R3612
75.5
RHH5269_R3641
69.7
Memory CD4 T-cell Th2 nTPM: 83.8
Samples: 4
Max nTPM: 96.7
Min nTPM: 66.5
RHH5305_R3671
96.7
RHH5213_R3584
92.6
RHH5241_R3613
79.2
RHH5270_R3642
66.5
Naive CD4 T-cell nTPM: 98.6
Samples: 4
Max nTPM: 130.8
Min nTPM: 67.3
RHH5306_R3672
112.7
RHH5214_R3585
130.8
RHH5242_R3614
67.3
RHH5271_R3643
83.7
Naive CD8 T-cell nTPM: 110.4
Samples: 4
Max nTPM: 156.4
Min nTPM: 45.5
RHH5201_R3572
148.7
RHH5229_R3601
45.5
RHH5258_R3630
156.4
RHH5287_R3659
90.9
Non-Vd2 gdTCR nTPM: 81.6
Samples: 4
Max nTPM: 108.6
Min nTPM: 52.7
RHH5235_R3607
52.7
RHH5264_R3636
108.6
RHH5207_R3578
81.0
RHH5299_R3665
84.0
T-reg nTPM: 79.8
Samples: 4
Max nTPM: 84.0
Min nTPM: 75.7
RHH5301_R3667
77.8
RHH5237_R3609
84.0
RHH5266_R3638
75.7
RHH5209_R3580
81.6
Terminal effector memory CD4 T-cell nTPM: 81.7
Samples: 2
Max nTPM: 98.1
Min nTPM: 65.3
RHH5243_R3615
65.3
RHH5272_R3644
98.1
Terminal effector memory CD8 T-cell nTPM: 79.1
Samples: 4
Max nTPM: 90.0
Min nTPM: 72.4
RHH5232_R3604
73.3
RHH5204_R3575
90.0
RHH5261_R3633
80.8
RHH5296_R3662
72.4
Vd2 gdTCR nTPM: 80.3
Samples: 4
Max nTPM: 100.9
Min nTPM: 67.0
RHH5234_R3606
100.9
RHH5206_R3577
80.5
RHH5263_R3635
67.0
RHH5298_R3664
72.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
