We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
40.7
nTPM
Monaco:
86.3
nTPM
Schmiedel:
84.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.7
HPA sample
nTPM
gdT-cell nTPM: 31.2
Samples: 6
Max nTPM: 42.8
Min nTPM: 21.8
P10809_1007
21.8
P10809_1022
28.6
P10809_1041
42.8
P10809_1060
32.6
P10809_1077
30.1
P10809_1098
31.2
MAIT T-cell nTPM: 24.1
Samples: 6
Max nTPM: 36.1
Min nTPM: 16.5
P10809_1006
16.5
P10809_1024
36.1
P10809_1043
22.7
P10809_1062
26.9
P10809_1083
17.8
P10809_1097
24.4
Memory CD4 T-cell nTPM: 33.3
Samples: 6
Max nTPM: 38.4
Min nTPM: 26.0
P10809_1014
26.0
P10809_1026
31.9
P10809_1045
37.2
P10809_1064
28.2
P10809_1086
38.4
P10809_1113
38.2
Memory CD8 T-cell nTPM: 30.9
Samples: 5
Max nTPM: 40.5
Min nTPM: 24.2
P10809_1012
24.2
P10809_1027
29.3
P10809_1046
29.2
P10809_1065
31.1
P10809_1111
40.5
Naive CD4 T-cell nTPM: 40.8
Samples: 6
Max nTPM: 59.1
Min nTPM: 29.9
P10809_1015
29.9
P10809_1030
40.8
P10809_1049
59.1
P10809_1068
41.9
P10809_1085
30.5
P10809_1112
42.3
Naive CD8 T-cell nTPM: 33.4
Samples: 6
Max nTPM: 40.8
Min nTPM: 28.5
P10809_1016
28.5
P10809_1031
29.6
P10809_1050
32.9
P10809_1069
31.1
P10809_1087
37.3
P10809_1110
40.8
T-reg nTPM: 31.5
Samples: 6
Max nTPM: 43.7
Min nTPM: 25.6
P10809_1018
25.6
P10809_1037
35.0
P10809_1056
25.6
P10809_1075
30.4
P10809_1094
43.7
P10809_1106
28.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
86.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 71.3
Samples: 4
Max nTPM: 97.6
Min nTPM: 53.5
RHH5202_R3573
60.2
RHH5230_R3602
97.6
RHH5259_R3631
73.9
RHH5288_R3660
53.5
Effector memory CD8 T-cell nTPM: 80.1
Samples: 4
Max nTPM: 88.6
Min nTPM: 73.2
RHH5203_R3574
78.2
RHH5231_R3603
73.2
RHH5260_R3632
88.6
RHH5289_R3661
80.3
MAIT T-cell nTPM: 81.1
Samples: 4
Max nTPM: 91.6
Min nTPM: 71.6
RHH5233_R3605
91.6
RHH5205_R3576
88.5
RHH5262_R3634
72.7
RHH5297_R3663
71.6
Memory CD4 T-cell TFH nTPM: 86.3
Samples: 4
Max nTPM: 127.7
Min nTPM: 46.2
RHH5300_R3666
46.2
RHH5236_R3608
108.1
RHH5265_R3637
63.3
RHH5208_R3579
127.7
Memory CD4 T-cell Th1 nTPM: 76.5
Samples: 4
Max nTPM: 91.2
Min nTPM: 62.1
RHH5210_R3581
91.2
RHH5302_R3668
62.1
RHH5238_R3610
90.0
RHH5267_R3639
62.8
Memory CD4 T-cell Th1/Th17 nTPM: 78.8
Samples: 4
Max nTPM: 88.4
Min nTPM: 73.8
RHH5303_R3669
73.8
RHH5211_R3582
88.4
RHH5239_R3611
77.9
RHH5268_R3640
75.2
Memory CD4 T-cell Th17 nTPM: 68.0
Samples: 4
Max nTPM: 88.4
Min nTPM: 52.6
RHH5304_R3670
64.5
RHH5212_R3583
66.6
RHH5240_R3612
88.4
RHH5269_R3641
52.6
Memory CD4 T-cell Th2 nTPM: 68.6
Samples: 4
Max nTPM: 85.2
Min nTPM: 61.3
RHH5305_R3671
64.6
RHH5213_R3584
85.2
RHH5241_R3613
61.3
RHH5270_R3642
63.1
Naive CD4 T-cell nTPM: 68.4
Samples: 4
Max nTPM: 85.6
Min nTPM: 54.7
RHH5306_R3672
66.6
RHH5214_R3585
85.6
RHH5242_R3614
66.6
RHH5271_R3643
54.7
Naive CD8 T-cell nTPM: 81.5
Samples: 4
Max nTPM: 90.9
Min nTPM: 76.0
RHH5201_R3572
78.9
RHH5229_R3601
90.9
RHH5258_R3630
80.1
RHH5287_R3659
76.0
Non-Vd2 gdTCR nTPM: 85.7
Samples: 4
Max nTPM: 100.3
Min nTPM: 71.8
RHH5235_R3607
100.3
RHH5264_R3636
89.1
RHH5207_R3578
81.7
RHH5299_R3665
71.8
T-reg nTPM: 77.1
Samples: 4
Max nTPM: 86.2
Min nTPM: 73.0
RHH5301_R3667
73.0
RHH5237_R3609
75.3
RHH5266_R3638
73.8
RHH5209_R3580
86.2
Terminal effector memory CD4 T-cell nTPM: 68.5
Samples: 2
Max nTPM: 72.0
Min nTPM: 65.0
RHH5243_R3615
65.0
RHH5272_R3644
72.0
Terminal effector memory CD8 T-cell nTPM: 76.3
Samples: 4
Max nTPM: 90.9
Min nTPM: 60.5
RHH5232_R3604
81.5
RHH5204_R3575
72.4
RHH5261_R3633
90.9
RHH5296_R3662
60.5
Vd2 gdTCR nTPM: 75.8
Samples: 4
Max nTPM: 83.5
Min nTPM: 62.6
RHH5234_R3606
77.2
RHH5206_R3577
83.5
RHH5263_R3635
79.9
RHH5298_R3664
62.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
