We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
90.9
nTPM
Monaco:
161.4
nTPM
Schmiedel:
118.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
90.9
HPA sample
nTPM
gdT-cell nTPM: 71.1
Samples: 6
Max nTPM: 84.0
Min nTPM: 54.4
P10809_1007
54.4
P10809_1022
77.1
P10809_1041
77.3
P10809_1060
65.0
P10809_1077
68.9
P10809_1098
84.0
MAIT T-cell nTPM: 90.9
Samples: 6
Max nTPM: 108.0
Min nTPM: 68.6
P10809_1006
68.6
P10809_1024
102.8
P10809_1043
106.6
P10809_1062
85.7
P10809_1083
73.9
P10809_1097
108.0
Memory CD4 T-cell nTPM: 71.0
Samples: 6
Max nTPM: 84.7
Min nTPM: 60.7
P10809_1014
70.1
P10809_1026
73.0
P10809_1045
63.6
P10809_1064
60.7
P10809_1086
73.9
P10809_1113
84.7
Memory CD8 T-cell nTPM: 71.7
Samples: 5
Max nTPM: 84.8
Min nTPM: 60.3
P10809_1012
67.3
P10809_1027
84.8
P10809_1046
69.5
P10809_1065
60.3
P10809_1111
76.7
Naive CD4 T-cell nTPM: 75.4
Samples: 6
Max nTPM: 90.5
Min nTPM: 53.8
P10809_1015
64.4
P10809_1030
90.5
P10809_1049
53.8
P10809_1068
81.4
P10809_1085
81.2
P10809_1112
80.8
Naive CD8 T-cell nTPM: 75.3
Samples: 6
Max nTPM: 83.2
Min nTPM: 64.9
P10809_1016
64.9
P10809_1031
83.2
P10809_1050
77.2
P10809_1069
82.5
P10809_1087
69.5
P10809_1110
74.3
T-reg nTPM: 82.8
Samples: 6
Max nTPM: 125.7
Min nTPM: 54.0
P10809_1018
82.2
P10809_1037
87.9
P10809_1056
54.0
P10809_1075
69.7
P10809_1094
125.7
P10809_1106
77.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
161.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 117.9
Samples: 4
Max nTPM: 146.5
Min nTPM: 103.9
RHH5202_R3573
103.9
RHH5230_R3602
146.5
RHH5259_R3631
107.4
RHH5288_R3660
113.7
Effector memory CD8 T-cell nTPM: 161.4
Samples: 4
Max nTPM: 181.3
Min nTPM: 136.6
RHH5203_R3574
136.6
RHH5231_R3603
176.1
RHH5260_R3632
151.5
RHH5289_R3661
181.3
MAIT T-cell nTPM: 126.7
Samples: 4
Max nTPM: 139.1
Min nTPM: 118.9
RHH5233_R3605
123.3
RHH5205_R3576
125.6
RHH5262_R3634
118.9
RHH5297_R3663
139.1
Memory CD4 T-cell TFH nTPM: 136.7
Samples: 4
Max nTPM: 146.5
Min nTPM: 123.3
RHH5300_R3666
140.9
RHH5236_R3608
136.1
RHH5265_R3637
146.5
RHH5208_R3579
123.3
Memory CD4 T-cell Th1 nTPM: 120.0
Samples: 4
Max nTPM: 137.1
Min nTPM: 100.2
RHH5210_R3581
100.2
RHH5302_R3668
119.5
RHH5238_R3610
123.0
RHH5267_R3639
137.1
Memory CD4 T-cell Th1/Th17 nTPM: 138.8
Samples: 4
Max nTPM: 161.4
Min nTPM: 108.0
RHH5303_R3669
161.4
RHH5211_R3582
139.1
RHH5239_R3611
108.0
RHH5268_R3640
146.7
Memory CD4 T-cell Th17 nTPM: 153.2
Samples: 4
Max nTPM: 192.6
Min nTPM: 110.0
RHH5304_R3670
169.5
RHH5212_R3583
110.0
RHH5240_R3612
192.6
RHH5269_R3641
140.7
Memory CD4 T-cell Th2 nTPM: 133.3
Samples: 4
Max nTPM: 147.5
Min nTPM: 106.5
RHH5305_R3671
147.5
RHH5213_R3584
141.2
RHH5241_R3613
106.5
RHH5270_R3642
137.8
Naive CD4 T-cell nTPM: 125.8
Samples: 4
Max nTPM: 149.8
Min nTPM: 96.0
RHH5306_R3672
149.8
RHH5214_R3585
96.0
RHH5242_R3614
119.4
RHH5271_R3643
137.9
Naive CD8 T-cell nTPM: 136.3
Samples: 4
Max nTPM: 163.1
Min nTPM: 90.4
RHH5201_R3572
151.8
RHH5229_R3601
90.4
RHH5258_R3630
163.1
RHH5287_R3659
140.0
Non-Vd2 gdTCR nTPM: 140.8
Samples: 4
Max nTPM: 181.4
Min nTPM: 105.0
RHH5235_R3607
161.7
RHH5264_R3636
181.4
RHH5207_R3578
115.1
RHH5299_R3665
105.0
T-reg nTPM: 123.0
Samples: 4
Max nTPM: 139.6
Min nTPM: 93.4
RHH5301_R3667
123.7
RHH5237_R3609
135.2
RHH5266_R3638
139.6
RHH5209_R3580
93.4
Terminal effector memory CD4 T-cell nTPM: 155.1
Samples: 2
Max nTPM: 155.4
Min nTPM: 154.8
RHH5243_R3615
154.8
RHH5272_R3644
155.4
Terminal effector memory CD8 T-cell nTPM: 140.0
Samples: 4
Max nTPM: 164.6
Min nTPM: 101.1
RHH5232_R3604
164.6
RHH5204_R3575
101.1
RHH5261_R3633
161.5
RHH5296_R3662
132.6
Vd2 gdTCR nTPM: 144.7
Samples: 4
Max nTPM: 191.7
Min nTPM: 127.0
RHH5234_R3606
127.0
RHH5206_R3577
131.7
RHH5263_R3635
191.7
RHH5298_R3664
128.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
