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CSRP3
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  • CSRP3
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CSRP3
Synonyms CLP, CMD1M, MLP
Gene descriptioni

Full gene name according to HGNC.

Cysteine and glycine rich protein 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 11
Cytoband p15.1
Chromosome location (bp) 19182030 - 19210571
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000129170 (version 109)
Entrez gene 8048
HGNC HGNC:2472
UniProt P50461 (UniProt - Evidence at protein level)
neXtProt NX_P50461
GeneCards CSRP3
Antibodypedia CSRP3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Positive regulator of myogenesis. Acts as cofactor for myogenic bHLH transcription factors such as MYOD1, and probably MYOG and MYF6. Enhances the DNA-binding activity of the MYOD1:TCF3 isoform E47 complex and may promote formation of a functional MYOD1:TCF3 isoform E47:MEF2A complex involved in myogenesis (By similarity). Plays a crucial and specific role in the organization of cytosolic structures in cardiomyocytes. Could play a role in mechanical stretch sensing. May be a scaffold protein that promotes the assembly of interacting proteins at Z-line structures. It is essential for calcineurin anchorage to the Z line. Required for stress-induced calcineurin-NFAT activation (By similarity). The role in regulation of cytoskeleton dynamics by association with CFL2 is reported conflictingly: Shown to enhance CFL2-mediated F-actin depolymerization dependent on the CSRP3:CFL2 molecular ratio, and also shown to reduce the ability of CLF1 and CFL2 to enhance actin depolymerization 1, 2. Proposed to contribute to the maintenance of muscle cell integrity through an actin-based mechanism. Can directly bind to actin filaments, cross-link actin filaments into bundles without polarity selectivity and protect them from dilution- and cofilin-mediated depolymerization; the function seems to involve its self-association 3. In vitro can inhibit PKC/PRKCA activity 4. Proposed to be involved in cardiac stress signaling by down-regulating excessive PKC/PRKCA signaling (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Actin-binding, Developmental protein
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Differentiation, Myogenesis, Transcription, Transcription regulation
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the CSRP family of LIM domain proteins, which may be involved in regulatory processes important for development and cellular differentiation. The LIM/double zinc-finger motif found in this protein is found in a group of proteins with critical functions in gene regulation, cell growth, and somatic differentiation. Mutations in this gene are thought to cause heritable forms of hypertrophic cardiomyopathy (HCM) and dilated cardiomyopathy (DCM) in humans. Alternatively spliced transcript variants with different 5' UTR, but encoding the same protein, have been found for this gene. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CSRP3-201
ENSP00000265968
ENST00000265968
P50461
[Direct mapping] Cysteine and glycine-rich protein 3
Show all
A2TDB8
[Target identity:100%; Query identity:100%] Cysteine and glycine-rich protein 3 (Cardiac LIM protein); Cysteine and glycine-rich protein 3 (Cardiac LIM protein), isoform CRA_a; cDNA, FLJ93801, Homo sapiens cysteine and glycine-rich protein 3 (cardiac LIMprotein) (CSRP3), mRNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002026 [regulation of the force of heart contraction]
GO:0003300 [cardiac muscle hypertrophy]
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006874 [cellular calcium ion homeostasis]
GO:0006954 [inflammatory response]
GO:0007507 [heart development]
GO:0007517 [muscle organ development]
GO:0007519 [skeletal muscle tissue development]
GO:0008286 [insulin receptor signaling pathway]
GO:0008307 [structural constituent of muscle]
GO:0030017 [sarcomere]
GO:0030018 [Z disc]
GO:0030036 [actin cytoskeleton organization]
GO:0030154 [cell differentiation]
GO:0031433 [telethonin binding]
GO:0033292 [T-tubule organization]
GO:0033365 [protein localization to organelle]
GO:0035995 [detection of muscle stretch]
GO:0042593 [glucose homeostasis]
GO:0042802 [identical protein binding]
GO:0042805 [actinin binding]
GO:0045214 [sarcomere organization]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0046716 [muscle cell cellular homeostasis]
GO:0046872 [metal ion binding]
GO:0048738 [cardiac muscle tissue development]
GO:0055003 [cardiac myofibril assembly]
GO:0060048 [cardiac muscle contraction]
GO:0060537 [muscle tissue development]
GO:0070528 [protein kinase C signaling]
GO:1903076 [regulation of protein localization to plasma membrane]
GO:1903920 [positive regulation of actin filament severing]
Show all
194 aa
21 kDa
No 0
CSRP3-202
ENSP00000431813
ENST00000533783
P50461
[Direct mapping] Cysteine and glycine-rich protein 3
Show all
A2TDB8
[Target identity:100%; Query identity:100%] Cysteine and glycine-rich protein 3 (Cardiac LIM protein); Cysteine and glycine-rich protein 3 (Cardiac LIM protein), isoform CRA_a; cDNA, FLJ93801, Homo sapiens cysteine and glycine-rich protein 3 (cardiac LIMprotein) (CSRP3), mRNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002026 [regulation of the force of heart contraction]
GO:0003300 [cardiac muscle hypertrophy]
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006874 [cellular calcium ion homeostasis]
GO:0007517 [muscle organ development]
GO:0007519 [skeletal muscle tissue development]
GO:0008307 [structural constituent of muscle]
GO:0030017 [sarcomere]
GO:0030018 [Z disc]
GO:0030036 [actin cytoskeleton organization]
GO:0030154 [cell differentiation]
GO:0031433 [telethonin binding]
GO:0033365 [protein localization to organelle]
GO:0035995 [detection of muscle stretch]
GO:0042802 [identical protein binding]
GO:0042805 [actinin binding]
GO:0045214 [sarcomere organization]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0046872 [metal ion binding]
GO:0048738 [cardiac muscle tissue development]
GO:0055003 [cardiac myofibril assembly]
GO:0060048 [cardiac muscle contraction]
GO:0060537 [muscle tissue development]
GO:1903920 [positive regulation of actin filament severing]
Show all
194 aa
21 kDa
No 0
CSRP3-203
ENSP00000496798
ENST00000647990
A0A3B3IRI5
[Direct mapping] Cysteine and glycine-rich protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0046872 [metal ion binding]
Show all
162 aa
17.9 kDa
No 0
CSRP3-204
ENSP00000497633
ENST00000648719
A0A3B3IT61
[Direct mapping] Cysteine and glycine-rich protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0046872 [metal ion binding]
Show all
59 aa
6.6 kDa
No 0
CSRP3-205
ENSP00000497388
ENST00000649235
P50461
[Direct mapping] Cysteine and glycine-rich protein 3
Show all
A2TDB8
[Target identity:100%; Query identity:100%] Cysteine and glycine-rich protein 3 (Cardiac LIM protein); Cysteine and glycine-rich protein 3 (Cardiac LIM protein), isoform CRA_a; cDNA, FLJ93801, Homo sapiens cysteine and glycine-rich protein 3 (cardiac LIMprotein) (CSRP3), mRNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002026 [regulation of the force of heart contraction]
GO:0003300 [cardiac muscle hypertrophy]
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006874 [cellular calcium ion homeostasis]
GO:0007517 [muscle organ development]
GO:0007519 [skeletal muscle tissue development]
GO:0008307 [structural constituent of muscle]
GO:0030017 [sarcomere]
GO:0030018 [Z disc]
GO:0030036 [actin cytoskeleton organization]
GO:0030154 [cell differentiation]
GO:0031433 [telethonin binding]
GO:0033365 [protein localization to organelle]
GO:0035995 [detection of muscle stretch]
GO:0042802 [identical protein binding]
GO:0042805 [actinin binding]
GO:0045214 [sarcomere organization]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0046872 [metal ion binding]
GO:0048738 [cardiac muscle tissue development]
GO:0055003 [cardiac myofibril assembly]
GO:0060048 [cardiac muscle contraction]
GO:0060537 [muscle tissue development]
GO:1903920 [positive regulation of actin filament severing]
Show all
194 aa
21 kDa
No 0
CSRP3-206
ENSP00000497531
ENST00000649842
A0A3B3ISZ2
[Direct mapping] Cysteine and glycine-rich protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Protein evidence (Ezkurdia et al 2014)
Show all
150 aa
16.8 kDa
No 0

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