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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
77.0
nTPM
Monaco:
134.9
nTPM
Schmiedel:
93.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
77.0
HPA sample
nTPM
gdT-cell nTPM: 61.1
Samples: 6
Max nTPM: 81.3
Min nTPM: 39.7
P10809_1007
39.7
P10809_1022
81.3
P10809_1041
66.0
P10809_1060
49.9
P10809_1077
78.2
P10809_1098
51.5
MAIT T-cell nTPM: 77.0
Samples: 6
Max nTPM: 96.7
Min nTPM: 57.4
P10809_1006
61.0
P10809_1024
96.7
P10809_1043
57.4
P10809_1062
77.0
P10809_1083
82.6
P10809_1097
87.2
Memory CD4 T-cell nTPM: 52.8
Samples: 6
Max nTPM: 68.4
Min nTPM: 34.1
P10809_1014
34.1
P10809_1026
55.7
P10809_1045
68.4
P10809_1064
53.1
P10809_1086
62.6
P10809_1113
42.9
Memory CD8 T-cell nTPM: 62.7
Samples: 5
Max nTPM: 78.9
Min nTPM: 43.3
P10809_1012
43.3
P10809_1027
78.9
P10809_1046
60.7
P10809_1065
71.5
P10809_1111
58.9
Naive CD4 T-cell nTPM: 51.7
Samples: 6
Max nTPM: 70.5
Min nTPM: 35.3
P10809_1015
35.3
P10809_1030
55.6
P10809_1049
59.3
P10809_1068
48.9
P10809_1085
70.5
P10809_1112
40.7
Naive CD8 T-cell nTPM: 54.7
Samples: 6
Max nTPM: 67.4
Min nTPM: 32.4
P10809_1016
32.4
P10809_1031
64.7
P10809_1050
49.4
P10809_1069
65.3
P10809_1087
67.4
P10809_1110
49.2
T-reg nTPM: 50.8
Samples: 6
Max nTPM: 68.7
Min nTPM: 34.9
P10809_1018
34.9
P10809_1037
56.5
P10809_1056
42.0
P10809_1075
64.4
P10809_1094
68.7
P10809_1106
38.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
134.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 98.8
Samples: 4
Max nTPM: 136.2
Min nTPM: 69.6
RHH5202_R3573
69.6
RHH5230_R3602
136.2
RHH5259_R3631
102.2
RHH5288_R3660
87.2
Effector memory CD8 T-cell nTPM: 109.7
Samples: 4
Max nTPM: 139.7
Min nTPM: 93.4
RHH5203_R3574
93.4
RHH5231_R3603
98.8
RHH5260_R3632
139.7
RHH5289_R3661
107.0
MAIT T-cell nTPM: 134.9
Samples: 4
Max nTPM: 158.7
Min nTPM: 121.2
RHH5233_R3605
123.5
RHH5205_R3576
136.2
RHH5262_R3634
158.7
RHH5297_R3663
121.2
Memory CD4 T-cell TFH nTPM: 83.6
Samples: 4
Max nTPM: 110.4
Min nTPM: 52.8
RHH5300_R3666
80.2
RHH5236_R3608
110.4
RHH5265_R3637
90.9
RHH5208_R3579
52.8
Memory CD4 T-cell Th1 nTPM: 96.3
Samples: 4
Max nTPM: 121.5
Min nTPM: 82.4
RHH5210_R3581
86.8
RHH5302_R3668
82.4
RHH5238_R3610
94.5
RHH5267_R3639
121.5
Memory CD4 T-cell Th1/Th17 nTPM: 105.7
Samples: 4
Max nTPM: 116.3
Min nTPM: 92.8
RHH5303_R3669
102.5
RHH5211_R3582
111.3
RHH5239_R3611
92.8
RHH5268_R3640
116.3
Memory CD4 T-cell Th17 nTPM: 92.6
Samples: 4
Max nTPM: 110.5
Min nTPM: 66.3
RHH5304_R3670
92.5
RHH5212_R3583
66.3
RHH5240_R3612
110.5
RHH5269_R3641
101.0
Memory CD4 T-cell Th2 nTPM: 94.5
Samples: 4
Max nTPM: 108.6
Min nTPM: 75.6
RHH5305_R3671
93.7
RHH5213_R3584
108.6
RHH5241_R3613
75.6
RHH5270_R3642
100.2
Naive CD4 T-cell nTPM: 92.6
Samples: 4
Max nTPM: 106.5
Min nTPM: 80.2
RHH5306_R3672
80.2
RHH5214_R3585
80.3
RHH5242_R3614
106.5
RHH5271_R3643
103.4
Naive CD8 T-cell nTPM: 99.8
Samples: 4
Max nTPM: 126.7
Min nTPM: 52.2
RHH5201_R3572
52.2
RHH5229_R3601
113.1
RHH5258_R3630
126.7
RHH5287_R3659
107.2
Non-Vd2 gdTCR nTPM: 116.0
Samples: 4
Max nTPM: 153.5
Min nTPM: 81.2
RHH5235_R3607
153.5
RHH5264_R3636
101.4
RHH5207_R3578
81.2
RHH5299_R3665
127.7
T-reg nTPM: 88.5
Samples: 4
Max nTPM: 108.3
Min nTPM: 69.1
RHH5301_R3667
69.1
RHH5237_R3609
108.3
RHH5266_R3638
87.7
RHH5209_R3580
88.9
Terminal effector memory CD4 T-cell nTPM: 119.9
Samples: 2
Max nTPM: 147.3
Min nTPM: 92.5
RHH5243_R3615
147.3
RHH5272_R3644
92.5
Terminal effector memory CD8 T-cell nTPM: 99.6
Samples: 4
Max nTPM: 138.6
Min nTPM: 77.9
RHH5232_R3604
138.6
RHH5204_R3575
77.9
RHH5261_R3633
83.8
RHH5296_R3662
97.9
Vd2 gdTCR nTPM: 129.0
Samples: 4
Max nTPM: 170.1
Min nTPM: 100.8
RHH5234_R3606
170.1
RHH5206_R3577
100.8
RHH5263_R3635
130.3
RHH5298_R3664
114.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
