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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
192.5
nTPM
FANTOM5:
170.1
Scaled Tags Per Million
Pig:
38.2
nTPM
Allen mouse:
0.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
192.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 156.5
2188
Female, age 91, both hemispheres
179.0
2301
Female, age 85, both hemispheres
169.2
2090
Male, age 80, both hemispheres
164.6
1984
Male, age 76, both hemispheres
113.3
Dorsal cochlear nucleus nTPM: 192.5
2378
Male, age 80, both hemispheres
210.5
2370
Male, age 61, both hemispheres
207.0
2802
Male, age 74, right hemisphere
206.1
2187
Female, age 91, both hemispheres
175.3
2058
Male, age 76, both hemispheres
163.6
Dorsal tegmental nucleus nTPM: 175.7
2083
Male, age 80, both hemispheres
193.4
2358
Male, age 61, both hemispheres
183.8
1936
Male, age 76, left hemisphere
164.0
2326
Male, age 74, both hemispheres
161.5
Dorsolateral tegmental area nTPM: 156.2
2654
Male, age 80, both hemispheres
210.8
2337
Male, age 61, both hemispheres
197.6
2751
Female, age 85, both hemispheres
139.7
2360
Male, age 74, both hemispheres
120.1
2141
Male, age 76, both hemispheres
112.9
Kolliker-Fuse nucleus nTPM: 167.6
2793
Female, age 91, left hemisphere
215.6
2163
Male, age 80, both hemispheres
156.6
2315
Male, age 76, right hemisphere
130.7
Lateral lemniscal nuclei nTPM: 139.7
2320
Female, age 91, left hemisphere
157.2
2036
Male, age 80, both hemispheres
155.1
2746
Female, age 85, left hemisphere
134.9
2169
Male, age 76, both hemispheres
133.9
2453
Male, age 74, right hemisphere
117.5
Lateral parabrachial nucleus nTPM: 168.6
2792
Male, age 76, both hemispheres
203.1
2790
Male, age 61, both hemispheres
179.8
2013
Male, age 80, both hemispheres
163.4
2139
Female, age 85, right hemisphere
128.1
Lateral vestibular nucleus nTPM: 172.6
2311
Male, age 80, both hemispheres
187.2
2184
Male, age 76, both hemispheres
158.0
Locus coeruleus nTPM: 108.6
2720
Male, age 74, both hemispheres
146.6
2162
Male, age 80, both hemispheres
137.0
2123
Female, age 91, both hemispheres
104.2
2317
Female, age 72, unknown
99.9
2014
Male, age 55, unknown
93.9
1980
Male, age 76, both hemispheres
91.5
2788
Male, age 74, unknown
87.1
Medial parabrachial nucleus nTPM: 174.2
2170
Female, age 91, both hemispheres
200.4
2156
Male, age 61, both hemispheres
182.7
2786
Male, age 76, both hemispheres
176.2
2463
Female, age 85, right hemisphere
167.3
2854
Male, age 80, both hemispheres
144.4
Medial periolivary nuclei nTPM: 135.4
2081
Male, age 80, both hemispheres
169.9
2458
Female, age 91, both hemispheres
159.7
2063
Male, age 76, both hemispheres
132.4
2171
Female, age 85, both hemispheres
122.4
2791
Male, age 74, right hemisphere
92.5
Motor facial nucleus nTPM: 148.6
2697
Female, age 85, both hemispheres
177.9
2795
Female, age 91, both hemispheres
170.7
2327
Male, age 80, both hemispheres
163.6
2126
Male, age 61, both hemispheres
153.8
2062
Male, age 76, both hemispheres
123.4
2365
Male, age 74, right hemisphere
101.9
Motor trigeminal nucleus nTPM: 170.3
2321
Female, age 91, both hemispheres
199.6
2309
Male, age 76, both hemispheres
176.9
2335
Male, age 61, both hemispheres
170.5
2560
Male, age 74, both hemispheres
158.6
2079
Male, age 80, both hemispheres
145.7
Nuclei of the trapezoid body nTPM: 140.1
2166
Male, age 80, both hemispheres
185.9
2368
Female, age 91, both hemispheres
160.1
2159
Male, age 61, both hemispheres
129.1
1983
Male, age 76, both hemispheres
124.4
2735
Female, age 85, both hemispheres
101.1
Nucleus raphe magnus nTPM: 139.6
2051
Male, age 76, both hemispheres
209.2
2328
Male, age 80, both hemispheres
177.0
2459
Female, age 91, both hemispheres
154.4
2172
Female, age 85, both hemispheres
108.0
2455
Male, age 74, both hemispheres
95.0
2160
Male, age 61, both hemispheres
93.9
Paramedian reticular nucleus nTPM: 153.1
2052
Male, age 76, both hemispheres
180.9
2057
Male, age 80, both hemispheres
148.4
2050
Female, age 85, both hemispheres
143.6
2313
Male, age 61, both hemispheres
139.4
Pedunculopontine tegmental nucleus nTPM: 139.3
2338
Male, age 61, both hemispheres
150.4
2334
Male, age 80, both hemispheres
148.6
1921
Female, age 85, both hemispheres
118.8
Pontine nuclei nTPM: 145.8
2115
Male, age 80, left hemisphere
203.5
1968
Male, age 76, left hemisphere
175.0
2319
Female, age 91, both hemispheres
170.1
2109
Female, age 72, unknown
140.0
2787
Female, age 85, both hemispheres
138.6
1863
Male, age 55, unknown
129.0
2454
Male, age 74, left hemisphere
116.2
2727
Male, age 61, right hemisphere
93.8
Pontine raphe nucleus nTPM: 117.1
2853
Male, age 76, midline
122.1
2122
Female, age 85, midline
112.1
Posteroventral cochlear nucleus nTPM: 183.8
2341
Male, age 80, both hemispheres
224.7
2371
Male, age 61, both hemispheres
215.2
2135
Female, age 91, both hemispheres
196.3
2070
Male, age 76, both hemispheres
153.3
2752
Female, age 85, both hemispheres
129.6
Principal sensory trigeminal nucleus nTPM: 141.7
2324
Male, age 76, both hemispheres
164.3
2367
Female, age 91, left hemisphere
156.3
2008
Male, age 80, left hemisphere
125.8
2158
Male, age 61, both hemispheres
120.5
Reticular pontine nucleus, caudal nTPM: 162.3
2559
Male, age 74, both hemispheres
168.2
2457
Female, age 91, both hemispheres
167.7
2332
Male, age 80, right hemisphere
161.9
2092
Male, age 76, both hemispheres
151.4
Reticular pontine nucleus, oral nTPM: 152.3
2366
Female, age 91, both hemispheres
183.8
2167
Male, age 76, both hemispheres
161.8
1939
Male, age 80, both hemispheres
149.5
2361
Male, age 74, both hemispheres
137.3
2012
Female, age 85, both hemispheres
129.2
Reticulotegmental nucleus nTPM: 168.3
2333
Male, age 80, both hemispheres
180.9
2452
Male, age 74, both hemispheres
180.9
2322
Female, age 91, both hemispheres
180.2
2325
Male, age 76, both hemispheres
131.1
Spinal trigeminal nucleus, oral nTPM: 143.5
2164
Male, age 80, both hemispheres
179.5
1978
Male, age 76, both hemispheres
140.5
2737
Female, age 85, both hemispheres
110.5
Subcoeruleus area nTPM: 148.2
2451
Male, age 74, both hemispheres
179.4
2369
Female, age 85, left hemisphere
161.2
2089
Male, age 76, left hemisphere
144.5
1958
Male, age 80, both hemispheres
130.2
2323
Female, age 91, left hemisphere
125.5
Superior olive nTPM: 157.2
2020
Male, age 76, both hemispheres
202.6
2561
Female, age 91, both hemispheres
196.6
2329
Male, age 80, right hemisphere
178.2
1875
Female, age 85, both hemispheres
118.4
2364
Male, age 74, right hemisphere
90.3
Ventral periolivary nuclei nTPM: 148.6
2023
Male, age 76, both hemispheres
177.6
2794
Female, age 91, left hemisphere
163.0
2165
Male, age 80, both hemispheres
150.1
2130
Female, age 85, both hemispheres
103.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 141.2
2161
Male, age 80, both hemispheres
169.2
2456
Female, age 91, both hemispheres
158.4
1959
Male, age 76, both hemispheres
142.0
2359
Male, age 61, both hemispheres
138.2
2840
Female, age 85, both hemispheres
136.1
2449
Male, age 74, both hemispheres
103.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
38.2
Pig sample
Sample description
nTPM
Pons nTPM: 38.2
Samples: 4
Max nTPM: 53.5
Min nTPM: 29.7
Sample A
Female
29.7
Sample B
Female
30.7
Sample C
Male
38.8
Sample D
Male
53.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
