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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
23.0
nTPM
Monaco:
178.6
nTPM
Schmiedel:
429.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
23.0
HPA sample
nTPM
gdT-cell nTPM: 23.0
Samples: 6
Max nTPM: 28.1
Min nTPM: 16.5
P10809_1007
23.2
P10809_1022
27.8
P10809_1041
17.8
P10809_1060
28.1
P10809_1077
24.6
P10809_1098
16.5
MAIT T-cell nTPM: 19.6
Samples: 6
Max nTPM: 23.1
Min nTPM: 14.4
P10809_1006
16.8
P10809_1024
22.0
P10809_1043
23.1
P10809_1062
20.5
P10809_1083
14.4
P10809_1097
20.9
Memory CD4 T-cell nTPM: 19.2
Samples: 6
Max nTPM: 25.1
Min nTPM: 13.9
P10809_1014
22.1
P10809_1026
25.1
P10809_1045
16.9
P10809_1064
18.1
P10809_1086
13.9
P10809_1113
19.1
Memory CD8 T-cell nTPM: 21.0
Samples: 5
Max nTPM: 24.6
Min nTPM: 18.0
P10809_1012
24.6
P10809_1027
23.3
P10809_1046
20.0
P10809_1065
18.0
P10809_1111
19.1
Naive CD4 T-cell nTPM: 18.3
Samples: 6
Max nTPM: 24.9
Min nTPM: 12.0
P10809_1015
20.2
P10809_1030
24.9
P10809_1049
12.2
P10809_1068
24.8
P10809_1085
12.0
P10809_1112
15.7
Naive CD8 T-cell nTPM: 19.0
Samples: 6
Max nTPM: 22.5
Min nTPM: 15.7
P10809_1016
22.5
P10809_1031
21.9
P10809_1050
19.7
P10809_1069
16.1
P10809_1087
15.7
P10809_1110
18.3
T-reg nTPM: 19.5
Samples: 6
Max nTPM: 30.6
Min nTPM: 7.6
P10809_1018
24.6
P10809_1037
16.5
P10809_1056
7.6
P10809_1075
30.6
P10809_1094
26.5
P10809_1106
11.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
178.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 163.8
Samples: 4
Max nTPM: 216.3
Min nTPM: 130.0
RHH5202_R3573
216.3
RHH5230_R3602
130.0
RHH5259_R3631
142.4
RHH5288_R3660
166.3
Effector memory CD8 T-cell nTPM: 127.8
Samples: 4
Max nTPM: 166.4
Min nTPM: 95.0
RHH5203_R3574
166.4
RHH5231_R3603
109.6
RHH5260_R3632
95.0
RHH5289_R3661
140.1
MAIT T-cell nTPM: 159.8
Samples: 4
Max nTPM: 190.8
Min nTPM: 134.2
RHH5233_R3605
190.8
RHH5205_R3576
150.5
RHH5262_R3634
134.2
RHH5297_R3663
163.6
Memory CD4 T-cell TFH nTPM: 154.8
Samples: 4
Max nTPM: 181.2
Min nTPM: 102.2
RHH5300_R3666
167.4
RHH5236_R3608
102.2
RHH5265_R3637
181.2
RHH5208_R3579
168.3
Memory CD4 T-cell Th1 nTPM: 172.2
Samples: 4
Max nTPM: 194.4
Min nTPM: 139.3
RHH5210_R3581
193.7
RHH5302_R3668
194.4
RHH5238_R3610
161.3
RHH5267_R3639
139.3
Memory CD4 T-cell Th1/Th17 nTPM: 140.0
Samples: 4
Max nTPM: 175.3
Min nTPM: 112.6
RHH5303_R3669
145.4
RHH5211_R3582
112.6
RHH5239_R3611
175.3
RHH5268_R3640
126.7
Memory CD4 T-cell Th17 nTPM: 125.4
Samples: 4
Max nTPM: 154.3
Min nTPM: 94.1
RHH5304_R3670
138.8
RHH5212_R3583
154.3
RHH5240_R3612
94.1
RHH5269_R3641
114.5
Memory CD4 T-cell Th2 nTPM: 172.3
Samples: 4
Max nTPM: 245.6
Min nTPM: 129.5
RHH5305_R3671
162.4
RHH5213_R3584
129.5
RHH5241_R3613
245.6
RHH5270_R3642
151.6
Naive CD4 T-cell nTPM: 178.6
Samples: 4
Max nTPM: 246.6
Min nTPM: 120.9
RHH5306_R3672
193.6
RHH5214_R3585
120.9
RHH5242_R3614
246.6
RHH5271_R3643
153.2
Naive CD8 T-cell nTPM: 170.9
Samples: 4
Max nTPM: 211.9
Min nTPM: 121.1
RHH5201_R3572
155.0
RHH5229_R3601
121.1
RHH5258_R3630
195.6
RHH5287_R3659
211.9
Non-Vd2 gdTCR nTPM: 147.0
Samples: 4
Max nTPM: 170.8
Min nTPM: 101.6
RHH5235_R3607
152.3
RHH5264_R3636
101.6
RHH5207_R3578
163.2
RHH5299_R3665
170.8
T-reg nTPM: 133.1
Samples: 4
Max nTPM: 173.0
Min nTPM: 96.1
RHH5301_R3667
173.0
RHH5237_R3609
96.1
RHH5266_R3638
117.5
RHH5209_R3580
145.7
Terminal effector memory CD4 T-cell nTPM: 148.0
Samples: 2
Max nTPM: 163.6
Min nTPM: 132.3
RHH5243_R3615
132.3
RHH5272_R3644
163.6
Terminal effector memory CD8 T-cell nTPM: 154.3
Samples: 4
Max nTPM: 186.8
Min nTPM: 112.0
RHH5232_R3604
167.2
RHH5204_R3575
151.1
RHH5261_R3633
112.0
RHH5296_R3662
186.8
Vd2 gdTCR nTPM: 145.4
Samples: 4
Max nTPM: 198.1
Min nTPM: 105.3
RHH5234_R3606
161.7
RHH5206_R3577
105.3
RHH5263_R3635
116.5
RHH5298_R3664
198.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
