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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
102.3
nTPM
Monaco:
221.8
nTPM
Schmiedel:
119.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
102.3
HPA sample
nTPM
gdT-cell nTPM: 73.3
Samples: 6
Max nTPM: 89.2
Min nTPM: 61.4
P10809_1007
62.3
P10809_1022
89.2
P10809_1041
61.4
P10809_1060
76.5
P10809_1077
79.9
P10809_1098
70.2
MAIT T-cell nTPM: 96.0
Samples: 6
Max nTPM: 106.5
Min nTPM: 60.7
P10809_1006
102.4
P10809_1024
105.0
P10809_1043
60.7
P10809_1062
96.1
P10809_1083
106.5
P10809_1097
105.4
Memory CD4 T-cell nTPM: 97.3
Samples: 6
Max nTPM: 109.6
Min nTPM: 88.1
P10809_1014
91.3
P10809_1026
97.1
P10809_1045
88.1
P10809_1064
94.5
P10809_1086
109.6
P10809_1113
103.1
Memory CD8 T-cell nTPM: 84.8
Samples: 5
Max nTPM: 102.1
Min nTPM: 70.3
P10809_1012
77.0
P10809_1027
85.6
P10809_1046
70.3
P10809_1065
88.8
P10809_1111
102.1
Naive CD4 T-cell nTPM: 73.5
Samples: 6
Max nTPM: 81.7
Min nTPM: 65.1
P10809_1015
77.2
P10809_1030
72.3
P10809_1049
65.1
P10809_1068
70.8
P10809_1085
81.7
P10809_1112
73.6
Naive CD8 T-cell nTPM: 79.4
Samples: 6
Max nTPM: 94.2
Min nTPM: 64.5
P10809_1016
76.3
P10809_1031
66.1
P10809_1050
64.5
P10809_1069
82.2
P10809_1087
94.2
P10809_1110
93.3
T-reg nTPM: 102.3
Samples: 6
Max nTPM: 127.4
Min nTPM: 77.3
P10809_1018
77.3
P10809_1037
108.6
P10809_1056
80.7
P10809_1075
112.2
P10809_1094
107.5
P10809_1106
127.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
221.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 171.1
Samples: 4
Max nTPM: 197.3
Min nTPM: 138.4
RHH5202_R3573
197.2
RHH5230_R3602
151.3
RHH5259_R3631
197.3
RHH5288_R3660
138.4
Effector memory CD8 T-cell nTPM: 163.5
Samples: 4
Max nTPM: 206.7
Min nTPM: 145.2
RHH5203_R3574
153.0
RHH5231_R3603
145.2
RHH5260_R3632
149.1
RHH5289_R3661
206.7
MAIT T-cell nTPM: 164.3
Samples: 4
Max nTPM: 232.7
Min nTPM: 124.5
RHH5233_R3605
129.6
RHH5205_R3576
232.7
RHH5262_R3634
170.5
RHH5297_R3663
124.5
Memory CD4 T-cell TFH nTPM: 173.9
Samples: 4
Max nTPM: 221.4
Min nTPM: 138.5
RHH5300_R3666
138.5
RHH5236_R3608
191.2
RHH5265_R3637
144.6
RHH5208_R3579
221.4
Memory CD4 T-cell Th1 nTPM: 146.6
Samples: 4
Max nTPM: 172.9
Min nTPM: 123.1
RHH5210_R3581
123.1
RHH5302_R3668
131.1
RHH5238_R3610
159.1
RHH5267_R3639
172.9
Memory CD4 T-cell Th1/Th17 nTPM: 184.3
Samples: 4
Max nTPM: 242.2
Min nTPM: 130.0
RHH5303_R3669
179.0
RHH5211_R3582
186.1
RHH5239_R3611
242.2
RHH5268_R3640
130.0
Memory CD4 T-cell Th17 nTPM: 221.8
Samples: 4
Max nTPM: 279.6
Min nTPM: 172.6
RHH5304_R3670
191.0
RHH5212_R3583
243.8
RHH5240_R3612
279.6
RHH5269_R3641
172.6
Memory CD4 T-cell Th2 nTPM: 184.0
Samples: 4
Max nTPM: 233.0
Min nTPM: 155.8
RHH5305_R3671
155.8
RHH5213_R3584
233.0
RHH5241_R3613
180.4
RHH5270_R3642
166.9
Naive CD4 T-cell nTPM: 132.5
Samples: 4
Max nTPM: 138.2
Min nTPM: 127.8
RHH5306_R3672
129.2
RHH5214_R3585
138.2
RHH5242_R3614
127.8
RHH5271_R3643
134.6
Naive CD8 T-cell nTPM: 147.9
Samples: 4
Max nTPM: 155.8
Min nTPM: 135.9
RHH5201_R3572
155.8
RHH5229_R3601
148.8
RHH5258_R3630
135.9
RHH5287_R3659
151.0
Non-Vd2 gdTCR nTPM: 163.2
Samples: 4
Max nTPM: 200.9
Min nTPM: 117.3
RHH5235_R3607
173.1
RHH5264_R3636
161.5
RHH5207_R3578
200.9
RHH5299_R3665
117.3
T-reg nTPM: 158.8
Samples: 4
Max nTPM: 188.5
Min nTPM: 123.7
RHH5301_R3667
123.7
RHH5237_R3609
188.5
RHH5266_R3638
134.9
RHH5209_R3580
188.2
Terminal effector memory CD4 T-cell nTPM: 147.4
Samples: 2
Max nTPM: 151.6
Min nTPM: 143.1
RHH5243_R3615
151.6
RHH5272_R3644
143.1
Terminal effector memory CD8 T-cell nTPM: 164.4
Samples: 4
Max nTPM: 174.0
Min nTPM: 145.5
RHH5232_R3604
174.0
RHH5204_R3575
145.5
RHH5261_R3633
173.2
RHH5296_R3662
164.9
Vd2 gdTCR nTPM: 151.9
Samples: 4
Max nTPM: 186.4
Min nTPM: 107.9
RHH5234_R3606
134.3
RHH5206_R3577
179.1
RHH5263_R3635
186.4
RHH5298_R3664
107.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
