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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
117.0
nTPM
Monaco:
131.8
nTPM
Schmiedel:
115.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
117.0
HPA sample
nTPM
gdT-cell nTPM: 61.0
Samples: 6
Max nTPM: 67.1
Min nTPM: 54.5
P10809_1007
62.2
P10809_1022
60.9
P10809_1041
57.2
P10809_1060
63.8
P10809_1077
54.5
P10809_1098
67.1
MAIT T-cell nTPM: 73.9
Samples: 6
Max nTPM: 109.9
Min nTPM: 54.2
P10809_1006
64.3
P10809_1024
109.9
P10809_1043
56.5
P10809_1062
76.9
P10809_1083
81.6
P10809_1097
54.2
Memory CD4 T-cell nTPM: 77.0
Samples: 6
Max nTPM: 85.7
Min nTPM: 66.1
P10809_1014
85.7
P10809_1026
85.2
P10809_1045
69.7
P10809_1064
75.5
P10809_1086
79.7
P10809_1113
66.1
Memory CD8 T-cell nTPM: 70.3
Samples: 5
Max nTPM: 76.3
Min nTPM: 56.4
P10809_1012
75.7
P10809_1027
69.8
P10809_1046
56.4
P10809_1065
76.3
P10809_1111
73.2
Naive CD4 T-cell nTPM: 76.9
Samples: 6
Max nTPM: 92.7
Min nTPM: 64.3
P10809_1015
92.7
P10809_1030
91.6
P10809_1049
77.6
P10809_1068
65.4
P10809_1085
70.0
P10809_1112
64.3
Naive CD8 T-cell nTPM: 71.3
Samples: 6
Max nTPM: 76.4
Min nTPM: 58.5
P10809_1016
74.2
P10809_1031
75.1
P10809_1050
58.5
P10809_1069
76.4
P10809_1087
74.8
P10809_1110
68.9
T-reg nTPM: 117.0
Samples: 6
Max nTPM: 139.9
Min nTPM: 100.1
P10809_1018
100.1
P10809_1037
126.3
P10809_1056
125.0
P10809_1075
105.2
P10809_1094
105.7
P10809_1106
139.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
131.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 98.9
Samples: 4
Max nTPM: 137.6
Min nTPM: 60.1
RHH5202_R3573
119.7
RHH5230_R3602
78.1
RHH5259_R3631
60.1
RHH5288_R3660
137.6
Effector memory CD8 T-cell nTPM: 121.3
Samples: 4
Max nTPM: 144.4
Min nTPM: 71.0
RHH5203_R3574
140.9
RHH5231_R3603
144.4
RHH5260_R3632
71.0
RHH5289_R3661
128.9
MAIT T-cell nTPM: 101.0
Samples: 4
Max nTPM: 115.0
Min nTPM: 74.2
RHH5233_R3605
115.0
RHH5205_R3576
74.2
RHH5262_R3634
114.2
RHH5297_R3663
100.7
Memory CD4 T-cell TFH nTPM: 116.4
Samples: 4
Max nTPM: 135.4
Min nTPM: 99.8
RHH5300_R3666
120.1
RHH5236_R3608
135.4
RHH5265_R3637
99.8
RHH5208_R3579
110.1
Memory CD4 T-cell Th1 nTPM: 102.1
Samples: 4
Max nTPM: 148.4
Min nTPM: 62.8
RHH5210_R3581
115.9
RHH5302_R3668
148.4
RHH5238_R3610
62.8
RHH5267_R3639
81.3
Memory CD4 T-cell Th1/Th17 nTPM: 115.8
Samples: 4
Max nTPM: 165.9
Min nTPM: 49.6
RHH5303_R3669
165.9
RHH5211_R3582
157.0
RHH5239_R3611
49.6
RHH5268_R3640
90.5
Memory CD4 T-cell Th17 nTPM: 86.4
Samples: 4
Max nTPM: 133.0
Min nTPM: 61.8
RHH5304_R3670
79.4
RHH5212_R3583
133.0
RHH5240_R3612
61.8
RHH5269_R3641
71.3
Memory CD4 T-cell Th2 nTPM: 108.9
Samples: 4
Max nTPM: 141.6
Min nTPM: 86.1
RHH5305_R3671
100.8
RHH5213_R3584
141.6
RHH5241_R3613
86.1
RHH5270_R3642
107.0
Naive CD4 T-cell nTPM: 124.8
Samples: 4
Max nTPM: 187.4
Min nTPM: 88.6
RHH5306_R3672
111.4
RHH5214_R3585
187.4
RHH5242_R3614
88.6
RHH5271_R3643
111.9
Naive CD8 T-cell nTPM: 108.8
Samples: 4
Max nTPM: 153.0
Min nTPM: 58.9
RHH5201_R3572
153.0
RHH5229_R3601
58.9
RHH5258_R3630
115.6
RHH5287_R3659
107.5
Non-Vd2 gdTCR nTPM: 121.7
Samples: 4
Max nTPM: 169.3
Min nTPM: 65.2
RHH5235_R3607
65.2
RHH5264_R3636
169.3
RHH5207_R3578
135.6
RHH5299_R3665
116.8
T-reg nTPM: 122.9
Samples: 4
Max nTPM: 141.5
Min nTPM: 95.8
RHH5301_R3667
126.2
RHH5237_R3609
141.5
RHH5266_R3638
95.8
RHH5209_R3580
128.2
Terminal effector memory CD4 T-cell nTPM: 98.6
Samples: 2
Max nTPM: 123.3
Min nTPM: 73.8
RHH5243_R3615
73.8
RHH5272_R3644
123.3
Terminal effector memory CD8 T-cell nTPM: 131.8
Samples: 4
Max nTPM: 153.0
Min nTPM: 106.1
RHH5232_R3604
148.6
RHH5204_R3575
119.5
RHH5261_R3633
106.1
RHH5296_R3662
153.0
Vd2 gdTCR nTPM: 113.8
Samples: 4
Max nTPM: 148.9
Min nTPM: 90.3
RHH5234_R3606
98.9
RHH5206_R3577
148.9
RHH5263_R3635
90.3
RHH5298_R3664
117.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
