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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
328.3
nTPM
Monaco:
82.5
nTPM
Schmiedel:
43.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
328.3
HPA sample
nTPM
gdT-cell nTPM: 215.3
Samples: 6
Max nTPM: 290.0
Min nTPM: 149.1
P10809_1007
149.1
P10809_1022
204.8
P10809_1041
290.0
P10809_1060
206.0
P10809_1077
232.8
P10809_1098
209.2
MAIT T-cell nTPM: 236.0
Samples: 6
Max nTPM: 333.0
Min nTPM: 107.2
P10809_1006
107.2
P10809_1024
333.0
P10809_1043
258.9
P10809_1062
241.6
P10809_1083
223.1
P10809_1097
252.1
Memory CD4 T-cell nTPM: 246.8
Samples: 6
Max nTPM: 291.6
Min nTPM: 162.3
P10809_1014
162.3
P10809_1026
291.6
P10809_1045
250.8
P10809_1064
274.0
P10809_1086
259.7
P10809_1113
242.6
Memory CD8 T-cell nTPM: 241.1
Samples: 5
Max nTPM: 286.2
Min nTPM: 155.2
P10809_1012
155.2
P10809_1027
286.2
P10809_1046
263.7
P10809_1065
263.4
P10809_1111
236.9
Naive CD4 T-cell nTPM: 230.6
Samples: 6
Max nTPM: 313.6
Min nTPM: 120.6
P10809_1015
120.6
P10809_1030
295.1
P10809_1049
313.6
P10809_1068
210.5
P10809_1085
247.1
P10809_1112
196.6
Naive CD8 T-cell nTPM: 233.9
Samples: 6
Max nTPM: 286.5
Min nTPM: 149.0
P10809_1016
149.0
P10809_1031
286.5
P10809_1050
250.0
P10809_1069
260.5
P10809_1087
253.9
P10809_1110
203.3
T-reg nTPM: 328.3
Samples: 6
Max nTPM: 430.4
Min nTPM: 183.1
P10809_1018
183.1
P10809_1037
409.8
P10809_1056
430.4
P10809_1075
307.0
P10809_1094
332.5
P10809_1106
307.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
82.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 49.3
Samples: 4
Max nTPM: 55.0
Min nTPM: 36.0
RHH5202_R3573
36.0
RHH5230_R3602
51.8
RHH5259_R3631
55.0
RHH5288_R3660
54.5
Effector memory CD8 T-cell nTPM: 46.1
Samples: 4
Max nTPM: 57.0
Min nTPM: 38.9
RHH5203_R3574
45.7
RHH5231_R3603
42.7
RHH5260_R3632
57.0
RHH5289_R3661
38.9
MAIT T-cell nTPM: 47.6
Samples: 4
Max nTPM: 59.1
Min nTPM: 27.2
RHH5233_R3605
27.2
RHH5205_R3576
59.1
RHH5262_R3634
47.9
RHH5297_R3663
56.3
Memory CD4 T-cell TFH nTPM: 44.0
Samples: 4
Max nTPM: 76.0
Min nTPM: 29.6
RHH5300_R3666
37.6
RHH5236_R3608
76.0
RHH5265_R3637
32.8
RHH5208_R3579
29.6
Memory CD4 T-cell Th1 nTPM: 56.9
Samples: 4
Max nTPM: 73.3
Min nTPM: 25.0
RHH5210_R3581
25.0
RHH5302_R3668
73.1
RHH5238_R3610
73.3
RHH5267_R3639
56.3
Memory CD4 T-cell Th1/Th17 nTPM: 51.3
Samples: 4
Max nTPM: 69.4
Min nTPM: 43.0
RHH5303_R3669
49.0
RHH5211_R3582
43.6
RHH5239_R3611
43.0
RHH5268_R3640
69.4
Memory CD4 T-cell Th17 nTPM: 50.5
Samples: 4
Max nTPM: 65.5
Min nTPM: 37.0
RHH5304_R3670
65.5
RHH5212_R3583
39.8
RHH5240_R3612
59.5
RHH5269_R3641
37.0
Memory CD4 T-cell Th2 nTPM: 51.4
Samples: 4
Max nTPM: 62.9
Min nTPM: 46.1
RHH5305_R3671
62.9
RHH5213_R3584
48.1
RHH5241_R3613
48.3
RHH5270_R3642
46.1
Naive CD4 T-cell nTPM: 49.1
Samples: 4
Max nTPM: 77.5
Min nTPM: 27.2
RHH5306_R3672
48.0
RHH5214_R3585
77.5
RHH5242_R3614
27.2
RHH5271_R3643
43.5
Naive CD8 T-cell nTPM: 38.6
Samples: 4
Max nTPM: 48.6
Min nTPM: 25.2
RHH5201_R3572
25.2
RHH5229_R3601
48.6
RHH5258_R3630
34.9
RHH5287_R3659
45.6
Non-Vd2 gdTCR nTPM: 52.7
Samples: 4
Max nTPM: 70.5
Min nTPM: 41.7
RHH5235_R3607
52.1
RHH5264_R3636
46.6
RHH5207_R3578
41.7
RHH5299_R3665
70.5
T-reg nTPM: 50.5
Samples: 4
Max nTPM: 59.8
Min nTPM: 35.2
RHH5301_R3667
59.8
RHH5237_R3609
58.6
RHH5266_R3638
35.2
RHH5209_R3580
48.5
Terminal effector memory CD4 T-cell nTPM: 36.5
Samples: 2
Max nTPM: 43.3
Min nTPM: 29.6
RHH5243_R3615
43.3
RHH5272_R3644
29.6
Terminal effector memory CD8 T-cell nTPM: 80.9
Samples: 4
Max nTPM: 156.6
Min nTPM: 40.7
RHH5232_R3604
40.7
RHH5204_R3575
156.6
RHH5261_R3633
74.8
RHH5296_R3662
51.3
Vd2 gdTCR nTPM: 82.5
Samples: 4
Max nTPM: 144.4
Min nTPM: 56.2
RHH5234_R3606
56.2
RHH5206_R3577
144.4
RHH5263_R3635
59.3
RHH5298_R3664
70.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
