We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
566.7
nTPM
Monaco:
161.8
nTPM
Schmiedel:
401.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
566.7
HPA sample
nTPM
gdT-cell nTPM: 529.9
Samples: 6
Max nTPM: 671.6
Min nTPM: 406.9
P10809_1007
406.9
P10809_1022
635.7
P10809_1041
671.6
P10809_1060
423.7
P10809_1077
583.9
P10809_1098
457.3
MAIT T-cell nTPM: 520.2
Samples: 6
Max nTPM: 638.3
Min nTPM: 326.2
P10809_1006
326.2
P10809_1024
634.1
P10809_1043
638.3
P10809_1062
528.9
P10809_1083
510.0
P10809_1097
483.4
Memory CD4 T-cell nTPM: 545.6
Samples: 6
Max nTPM: 648.3
Min nTPM: 391.7
P10809_1014
391.7
P10809_1026
648.3
P10809_1045
544.4
P10809_1064
553.3
P10809_1086
634.3
P10809_1113
501.5
Memory CD8 T-cell nTPM: 501.6
Samples: 5
Max nTPM: 606.2
Min nTPM: 359.3
P10809_1012
359.3
P10809_1027
606.2
P10809_1046
551.9
P10809_1065
509.0
P10809_1111
481.5
Naive CD4 T-cell nTPM: 566.7
Samples: 6
Max nTPM: 684.1
Min nTPM: 422.1
P10809_1015
422.1
P10809_1030
670.5
P10809_1049
684.1
P10809_1068
561.8
P10809_1085
584.2
P10809_1112
477.3
Naive CD8 T-cell nTPM: 499.3
Samples: 6
Max nTPM: 600.8
Min nTPM: 392.3
P10809_1016
392.3
P10809_1031
600.8
P10809_1050
525.5
P10809_1069
492.2
P10809_1087
549.0
P10809_1110
436.2
T-reg nTPM: 562.1
Samples: 6
Max nTPM: 646.6
Min nTPM: 417.1
P10809_1018
417.1
P10809_1037
595.0
P10809_1056
631.4
P10809_1075
552.4
P10809_1094
646.6
P10809_1106
529.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
161.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 92.4
Samples: 4
Max nTPM: 112.4
Min nTPM: 60.8
RHH5202_R3573
60.8
RHH5230_R3602
85.7
RHH5259_R3631
112.4
RHH5288_R3660
110.5
Effector memory CD8 T-cell nTPM: 71.8
Samples: 4
Max nTPM: 101.4
Min nTPM: 55.8
RHH5203_R3574
68.2
RHH5231_R3603
55.8
RHH5260_R3632
101.4
RHH5289_R3661
61.9
MAIT T-cell nTPM: 102.8
Samples: 4
Max nTPM: 112.9
Min nTPM: 75.7
RHH5233_R3605
75.7
RHH5205_R3576
111.7
RHH5262_R3634
110.9
RHH5297_R3663
112.9
Memory CD4 T-cell TFH nTPM: 111.9
Samples: 4
Max nTPM: 197.6
Min nTPM: 70.2
RHH5300_R3666
93.5
RHH5236_R3608
197.6
RHH5265_R3637
86.1
RHH5208_R3579
70.2
Memory CD4 T-cell Th1 nTPM: 128.3
Samples: 4
Max nTPM: 160.1
Min nTPM: 84.7
RHH5210_R3581
84.7
RHH5302_R3668
145.8
RHH5238_R3610
160.1
RHH5267_R3639
122.5
Memory CD4 T-cell Th1/Th17 nTPM: 115.1
Samples: 4
Max nTPM: 137.4
Min nTPM: 96.4
RHH5303_R3669
137.4
RHH5211_R3582
96.4
RHH5239_R3611
109.7
RHH5268_R3640
116.7
Memory CD4 T-cell Th17 nTPM: 100.8
Samples: 4
Max nTPM: 114.3
Min nTPM: 85.7
RHH5304_R3670
114.3
RHH5212_R3583
106.7
RHH5240_R3612
96.5
RHH5269_R3641
85.7
Memory CD4 T-cell Th2 nTPM: 100.1
Samples: 4
Max nTPM: 103.6
Min nTPM: 92.7
RHH5305_R3671
103.6
RHH5213_R3584
92.7
RHH5241_R3613
100.7
RHH5270_R3642
103.5
Naive CD4 T-cell nTPM: 120.7
Samples: 4
Max nTPM: 160.5
Min nTPM: 94.4
RHH5306_R3672
123.0
RHH5214_R3585
160.5
RHH5242_R3614
94.4
RHH5271_R3643
104.9
Naive CD8 T-cell nTPM: 91.5
Samples: 4
Max nTPM: 111.1
Min nTPM: 77.1
RHH5201_R3572
84.4
RHH5229_R3601
93.5
RHH5258_R3630
77.1
RHH5287_R3659
111.1
Non-Vd2 gdTCR nTPM: 115.7
Samples: 4
Max nTPM: 130.4
Min nTPM: 102.1
RHH5235_R3607
102.9
RHH5264_R3636
127.4
RHH5207_R3578
102.1
RHH5299_R3665
130.4
T-reg nTPM: 118.2
Samples: 4
Max nTPM: 139.1
Min nTPM: 90.4
RHH5301_R3667
139.1
RHH5237_R3609
127.0
RHH5266_R3638
90.4
RHH5209_R3580
116.2
Terminal effector memory CD4 T-cell nTPM: 82.6
Samples: 2
Max nTPM: 86.4
Min nTPM: 78.8
RHH5243_R3615
86.4
RHH5272_R3644
78.8
Terminal effector memory CD8 T-cell nTPM: 127.7
Samples: 4
Max nTPM: 215.0
Min nTPM: 63.3
RHH5232_R3604
63.3
RHH5204_R3575
215.0
RHH5261_R3633
126.7
RHH5296_R3662
105.9
Vd2 gdTCR nTPM: 161.8
Samples: 4
Max nTPM: 246.0
Min nTPM: 102.4
RHH5234_R3606
102.4
RHH5206_R3577
246.0
RHH5263_R3635
115.2
RHH5298_R3664
183.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
