HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:22.3 nTPM
HPA Brain:27.0 nTPM
GTEx:22.3 nTPM
FANTOM5:37.0 Scaled Tags Per Million
Pig:47.4 nTPM
Mouse:31.7 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057503
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.0
Sample id Sample description nTPM
Hippocampus
nTPM: 18.3
1898 Male, age 80, left hemisphere 25.9
2529 Female, age 94, left hemisphere 20.0
1911 Female, age 85, right hemisphere 18.0
2621 Female, age 67, right hemisphere 16.0
2148 Female, age 91, left hemisphere 15.3
1855 Male, age 76, left hemisphere 14.7
Dentate gyrus
nTPM: 17.9
1927 Female, age 91, both hemispheres 21.6
2528 Male, age 74, both hemispheres 21.4
2246 Female, age 85, both hemispheres 19.7
2010 Male, age 76, both hemispheres 19.5
2530 Female, age 94, left hemisphere 13.6
2531 Female, age 67, both hemispheres 11.6
Entorhinal gyrus
nTPM: 19.8
1938 Female, age 85, left hemisphere 25.3
2764 Male, age 80, right hemisphere 21.8
1787 Male, age 76, left hemisphere 21.6
2613 Female, age 94, left hemisphere 18.2
2117 Female, age 91, right hemisphere 17.5
2686 Male, age 75, right hemisphere 14.4
Hippocampus, CA1
nTPM: 22.4
2749 Male, age 80, left hemisphere 33.2
2527 Male, age 74, both hemispheres 23.0
1873 Female, age 85, both hemispheres 20.8
2082 Female, age 91, right hemisphere 18.8
2045 Male, age 76, both hemispheres 16.2
Hippocampus, CA2
nTPM: 22.2
2249 Male, age 74, both hemispheres 36.6
1892 Male, age 76, both hemispheres 27.2
1963 Male, age 80, left hemisphere 20.4
2113 Female, age 91, right hemisphere 18.4
1940 Female, age 85, left hemisphere 15.9
2437 Female, age 94, left hemisphere 14.8
Hippocampus, CA3
nTPM: 24.3
2436 Male, age 74, both hemispheres 52.3
2137 Male, age 80, left hemisphere 25.6
1867 Male, age 76, both hemispheres 23.8
1891 Female, age 85, both hemispheres 19.5
2620 Female, age 94, left hemisphere 15.0
2861 Female, age 67, both hemispheres 9.4
Parahippocampal cortex
nTPM: 20.8
2250 Female, age 67, right hemisphere 25.9
1850 Male, age 80, both hemispheres 25.6
1990 Female, age 91, right hemisphere 23.6
1933 Female, age 85, both hemispheres 22.7
2693 Female, age 94, both hemispheres 21.3
2245 Female, age 91, both hemispheres 19.9
2018 Male, age 76, both hemispheres 18.6
2692 Male, age 74, both hemispheres 18.0
2622 Female, age 67, right hemisphere 16.8
2532 Female, age 72, left hemisphere 15.9
Perirhinal gyrus
nTPM: 27.0
1847 Female, age 91, left hemisphere 36.3
1794 Male, age 80, right hemisphere 26.8
2521 Female, age 94, right hemisphere 26.5
1841 Female, age 85, right hemisphere 25.4
2848 Male, age 76, right hemisphere 19.8
Subiculum
nTPM: 17.4
1977 Female, age 85, both hemispheres 20.9
1901 Male, age 80, both hemispheres 18.7
2619 Male, age 74, both hemispheres 18.1
2729 Female, age 91, right hemisphere 18.1
2042 Male, age 76, both hemispheres 15.0
2438 Female, age 94, left hemisphere 13.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.3
Samples: 197

Max nTPM: 56.2
Min nTPM: 5.2
Std nTPM: 6.9
Median nTPM: 22.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 56.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 39.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 38.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 35.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 35.4
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 34.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 34.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 33.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 33.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 32.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 32.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.0
FF:10153-102I9 76 years, female 41.9
FF:10169-103B7 60 years, female 32.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.4
Pig sample Sample description nTPM
Subiculum
nTPM: 47.4
Samples: 4

Max nTPM: 56.8
Min nTPM: 42.4
Sample A Female 56.8
Sample B Female 46.0
Sample C Male 44.4
Sample D Male 42.4
Dorsal hippocampus
nTPM: 43.0
Samples: 4

Max nTPM: 49.4
Min nTPM: 35.2
Sample A Female 49.4
Sample B Female 40.5
Sample C Male 46.7
Sample D Male 35.2
Entorhinal cortex
nTPM: 37.3
Samples: 4

Max nTPM: 41.7
Min nTPM: 32.9
Sample A Female 37.1
Sample B Female 37.5
Sample C Male 41.7
Sample D Male 32.9
Ventral hippocampus
nTPM: 43.0
Samples: 4

Max nTPM: 51.8
Min nTPM: 33.7
Sample A Female 51.8
Sample B Female 33.7
Sample C Male 49.5
Sample D Male 37.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.7
Samples: 4

Max nTPM: 40.3
Min nTPM: 27.1
Sample A Male 27.1
Sample B Male 29.5
Sample C Female 30.0
Sample D Female 40.3
Hippocampal formation
nTPM: 25.0
Samples: 4

Max nTPM: 30.0
Min nTPM: 21.7
Sample A Male 30.0
Sample B Male 24.0
Sample C Female 21.7
Sample D Female 24.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
68302184 Antisense, RP_041130_02_D02, Mouse strain C57BL/6J (56 days, male) 2.6
74583197 Antisense, RP_051214_01_B04, Mouse strain C57BL/6J (56 days, male) 1.3

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