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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
178.5
nTPM
Monaco:
227.7
nTPM
Schmiedel:
75.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
178.5
HPA sample
nTPM
gdT-cell nTPM: 140.6
Samples: 6
Max nTPM: 184.3
Min nTPM: 111.2
P10809_1007
111.2
P10809_1022
145.4
P10809_1041
184.3
P10809_1060
116.5
P10809_1077
157.1
P10809_1098
128.9
MAIT T-cell nTPM: 149.8
Samples: 6
Max nTPM: 184.2
Min nTPM: 128.1
P10809_1006
128.1
P10809_1024
175.0
P10809_1043
184.2
P10809_1062
145.9
P10809_1083
134.3
P10809_1097
131.3
Memory CD4 T-cell nTPM: 113.1
Samples: 6
Max nTPM: 128.3
Min nTPM: 96.2
P10809_1014
96.2
P10809_1026
112.1
P10809_1045
118.1
P10809_1064
116.8
P10809_1086
128.3
P10809_1113
106.8
Memory CD8 T-cell nTPM: 134.0
Samples: 5
Max nTPM: 147.7
Min nTPM: 121.5
P10809_1012
121.5
P10809_1027
147.7
P10809_1046
140.3
P10809_1065
130.6
P10809_1111
129.8
Naive CD4 T-cell nTPM: 52.7
Samples: 6
Max nTPM: 72.7
Min nTPM: 43.7
P10809_1015
43.8
P10809_1030
49.6
P10809_1049
52.2
P10809_1068
54.2
P10809_1085
72.7
P10809_1112
43.7
Naive CD8 T-cell nTPM: 95.0
Samples: 6
Max nTPM: 148.1
Min nTPM: 50.8
P10809_1016
50.8
P10809_1031
86.0
P10809_1050
99.6
P10809_1069
124.9
P10809_1087
148.1
P10809_1110
60.4
T-reg nTPM: 178.5
Samples: 6
Max nTPM: 220.5
Min nTPM: 130.8
P10809_1018
130.8
P10809_1037
149.1
P10809_1056
196.1
P10809_1075
220.5
P10809_1094
201.8
P10809_1106
172.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
227.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 135.6
Samples: 4
Max nTPM: 163.2
Min nTPM: 113.9
RHH5202_R3573
113.9
RHH5230_R3602
123.3
RHH5259_R3631
163.2
RHH5288_R3660
141.8
Effector memory CD8 T-cell nTPM: 188.3
Samples: 4
Max nTPM: 234.6
Min nTPM: 147.0
RHH5203_R3574
147.0
RHH5231_R3603
200.8
RHH5260_R3632
170.6
RHH5289_R3661
234.6
MAIT T-cell nTPM: 183.2
Samples: 4
Max nTPM: 214.0
Min nTPM: 164.0
RHH5233_R3605
171.4
RHH5205_R3576
214.0
RHH5262_R3634
164.0
RHH5297_R3663
183.5
Memory CD4 T-cell TFH nTPM: 89.3
Samples: 4
Max nTPM: 106.4
Min nTPM: 79.5
RHH5300_R3666
85.2
RHH5236_R3608
79.5
RHH5265_R3637
86.0
RHH5208_R3579
106.4
Memory CD4 T-cell Th1 nTPM: 115.3
Samples: 4
Max nTPM: 153.7
Min nTPM: 63.3
RHH5210_R3581
63.3
RHH5302_R3668
117.9
RHH5238_R3610
153.7
RHH5267_R3639
126.2
Memory CD4 T-cell Th1/Th17 nTPM: 180.5
Samples: 4
Max nTPM: 221.3
Min nTPM: 144.5
RHH5303_R3669
221.3
RHH5211_R3582
175.2
RHH5239_R3611
181.1
RHH5268_R3640
144.5
Memory CD4 T-cell Th17 nTPM: 172.8
Samples: 4
Max nTPM: 194.2
Min nTPM: 134.4
RHH5304_R3670
194.2
RHH5212_R3583
175.4
RHH5240_R3612
187.2
RHH5269_R3641
134.4
Memory CD4 T-cell Th2 nTPM: 121.4
Samples: 4
Max nTPM: 138.5
Min nTPM: 107.1
RHH5305_R3671
138.5
RHH5213_R3584
107.1
RHH5241_R3613
112.7
RHH5270_R3642
127.3
Naive CD4 T-cell nTPM: 57.4
Samples: 4
Max nTPM: 73.9
Min nTPM: 32.9
RHH5306_R3672
57.2
RHH5214_R3585
65.5
RHH5242_R3614
32.9
RHH5271_R3643
73.9
Naive CD8 T-cell nTPM: 67.9
Samples: 4
Max nTPM: 83.3
Min nTPM: 42.8
RHH5201_R3572
82.0
RHH5229_R3601
83.3
RHH5258_R3630
42.8
RHH5287_R3659
63.3
Non-Vd2 gdTCR nTPM: 179.3
Samples: 4
Max nTPM: 218.7
Min nTPM: 155.2
RHH5235_R3607
155.2
RHH5264_R3636
186.4
RHH5207_R3578
218.7
RHH5299_R3665
156.9
T-reg nTPM: 100.5
Samples: 4
Max nTPM: 128.8
Min nTPM: 81.9
RHH5301_R3667
128.8
RHH5237_R3609
81.9
RHH5266_R3638
108.2
RHH5209_R3580
83.2
Terminal effector memory CD4 T-cell nTPM: 204.4
Samples: 2
Max nTPM: 204.9
Min nTPM: 203.9
RHH5243_R3615
203.9
RHH5272_R3644
204.9
Terminal effector memory CD8 T-cell nTPM: 227.8
Samples: 4
Max nTPM: 264.0
Min nTPM: 196.7
RHH5232_R3604
264.0
RHH5204_R3575
196.7
RHH5261_R3633
202.5
RHH5296_R3662
247.8
Vd2 gdTCR nTPM: 192.4
Samples: 4
Max nTPM: 235.2
Min nTPM: 167.3
RHH5234_R3606
189.6
RHH5206_R3577
235.2
RHH5263_R3635
167.3
RHH5298_R3664
177.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
