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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
228.2
nTPM
Monaco:
171.3
nTPM
Schmiedel:
653.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
228.2
HPA sample
nTPM
gdT-cell nTPM: 113.0
Samples: 6
Max nTPM: 267.6
Min nTPM: 0.2
P10809_1007
267.6
P10809_1022
222.0
P10809_1041
0.7
P10809_1060
0.2
P10809_1077
187.3
P10809_1098
0.3
MAIT T-cell nTPM: 168.8
Samples: 6
Max nTPM: 417.1
Min nTPM: 0.3
P10809_1006
307.4
P10809_1024
417.1
P10809_1043
0.6
P10809_1062
0.3
P10809_1083
287.1
P10809_1097
0.4
Memory CD4 T-cell nTPM: 188.0
Samples: 6
Max nTPM: 428.5
Min nTPM: 0.4
P10809_1014
408.0
P10809_1026
428.5
P10809_1045
0.4
P10809_1064
0.4
P10809_1086
290.3
P10809_1113
0.4
Memory CD8 T-cell nTPM: 116.1
Samples: 5
Max nTPM: 314.9
Min nTPM: 0.2
P10809_1012
314.9
P10809_1027
264.4
P10809_1046
0.2
P10809_1065
0.4
P10809_1111
0.5
Naive CD4 T-cell nTPM: 228.2
Samples: 6
Max nTPM: 520.2
Min nTPM: 0.1
P10809_1015
502.2
P10809_1030
520.2
P10809_1049
0.3
P10809_1068
0.7
P10809_1085
345.5
P10809_1112
0.1
Naive CD8 T-cell nTPM: 214.3
Samples: 6
Max nTPM: 623.8
Min nTPM: 0.1
P10809_1016
623.8
P10809_1031
444.5
P10809_1050
0.5
P10809_1069
0.5
P10809_1087
216.2
P10809_1110
0.1
T-reg nTPM: 170.5
Samples: 6
Max nTPM: 448.9
Min nTPM: 0.1
P10809_1018
353.1
P10809_1037
448.9
P10809_1056
0.4
P10809_1075
0.4
P10809_1094
219.8
P10809_1106
0.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
171.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 104.9
Samples: 4
Max nTPM: 218.8
Min nTPM: 0.0
RHH5202_R3573
218.8
RHH5230_R3602
200.7
RHH5259_R3631
0.2
RHH5288_R3660
0.0
Effector memory CD8 T-cell nTPM: 72.9
Samples: 4
Max nTPM: 147.5
Min nTPM: 0.0
RHH5203_R3574
144.1
RHH5231_R3603
147.5
RHH5260_R3632
0.0
RHH5289_R3661
0.0
MAIT T-cell nTPM: 94.6
Samples: 4
Max nTPM: 209.5
Min nTPM: 0.0
RHH5233_R3605
209.5
RHH5205_R3576
169.0
RHH5262_R3634
0.0
RHH5297_R3663
0.0
Memory CD4 T-cell TFH nTPM: 159.9
Samples: 4
Max nTPM: 389.6
Min nTPM: 0.0
RHH5300_R3666
0.0
RHH5236_R3608
389.6
RHH5265_R3637
0.0
RHH5208_R3579
249.8
Memory CD4 T-cell Th1 nTPM: 124.1
Samples: 4
Max nTPM: 265.2
Min nTPM: 0.0
RHH5210_R3581
265.2
RHH5302_R3668
0.0
RHH5238_R3610
231.2
RHH5267_R3639
0.0
Memory CD4 T-cell Th1/Th17 nTPM: 114.0
Samples: 4
Max nTPM: 295.8
Min nTPM: 0.0
RHH5303_R3669
0.0
RHH5211_R3582
295.8
RHH5239_R3611
160.0
RHH5268_R3640
0.0
Memory CD4 T-cell Th17 nTPM: 95.2
Samples: 4
Max nTPM: 261.2
Min nTPM: 0.0
RHH5304_R3670
0.0
RHH5212_R3583
261.2
RHH5240_R3612
119.7
RHH5269_R3641
0.0
Memory CD4 T-cell Th2 nTPM: 166.5
Samples: 4
Max nTPM: 382.2
Min nTPM: 0.0
RHH5305_R3671
0.0
RHH5213_R3584
283.5
RHH5241_R3613
382.2
RHH5270_R3642
0.2
Naive CD4 T-cell nTPM: 171.3
Samples: 4
Max nTPM: 408.5
Min nTPM: 0.2
RHH5306_R3672
0.4
RHH5214_R3585
408.5
RHH5242_R3614
276.2
RHH5271_R3643
0.2
Naive CD8 T-cell nTPM: 148.5
Samples: 4
Max nTPM: 369.7
Min nTPM: 0.0
RHH5201_R3572
369.7
RHH5229_R3601
224.1
RHH5258_R3630
0.0
RHH5287_R3659
0.2
Non-Vd2 gdTCR nTPM: 72.9
Samples: 4
Max nTPM: 167.3
Min nTPM: 0.0
RHH5235_R3607
124.3
RHH5264_R3636
0.0
RHH5207_R3578
167.3
RHH5299_R3665
0.0
T-reg nTPM: 123.8
Samples: 4
Max nTPM: 260.6
Min nTPM: 0.0
RHH5301_R3667
0.0
RHH5237_R3609
260.6
RHH5266_R3638
0.0
RHH5209_R3580
234.7
Terminal effector memory CD4 T-cell nTPM: 56.5
Samples: 2
Max nTPM: 113.0
Min nTPM: 0.0
RHH5243_R3615
113.0
RHH5272_R3644
0.0
Terminal effector memory CD8 T-cell nTPM: 134.5
Samples: 4
Max nTPM: 381.8
Min nTPM: 0.0
RHH5232_R3604
156.2
RHH5204_R3575
381.8
RHH5261_R3633
0.0
RHH5296_R3662
0.0
Vd2 gdTCR nTPM: 141.5
Samples: 4
Max nTPM: 374.4
Min nTPM: 0.0
RHH5234_R3606
191.6
RHH5206_R3577
374.4
RHH5263_R3635
0.0
RHH5298_R3664
0.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
