HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:30.5 nTPM
HPA Brain:52.9 nTPM
GTEx:30.5 nTPM
FANTOM5:37.0 Scaled Tags Per Million
Pig:22.6 nTPM
Mouse:20.6 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052293Antibody HPA057034
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.9
Sample id Sample description nTPM
Hippocampus
nTPM: 48.3
2621 Female, age 67, right hemisphere 62.1
2529 Female, age 94, left hemisphere 61.2
1911 Female, age 85, right hemisphere 52.8
2148 Female, age 91, left hemisphere 44.3
1898 Male, age 80, left hemisphere 38.9
1855 Male, age 76, left hemisphere 30.8
Dentate gyrus
nTPM: 41.9
1927 Female, age 91, both hemispheres 57.0
2530 Female, age 94, left hemisphere 51.0
2246 Female, age 85, both hemispheres 37.8
2531 Female, age 67, both hemispheres 35.5
2010 Male, age 76, both hemispheres 35.4
2528 Male, age 74, both hemispheres 34.3
Entorhinal gyrus
nTPM: 48.8
2613 Female, age 94, left hemisphere 73.7
1787 Male, age 76, left hemisphere 55.0
2764 Male, age 80, right hemisphere 47.1
1938 Female, age 85, left hemisphere 46.0
2686 Male, age 75, right hemisphere 40.6
2117 Female, age 91, right hemisphere 30.6
Hippocampus, CA1
nTPM: 52.9
2749 Male, age 80, left hemisphere 88.0
2527 Male, age 74, both hemispheres 65.3
2082 Female, age 91, right hemisphere 56.3
1873 Female, age 85, both hemispheres 34.2
2045 Male, age 76, both hemispheres 20.7
Hippocampus, CA2
nTPM: 46.0
1963 Male, age 80, left hemisphere 59.1
2249 Male, age 74, both hemispheres 51.1
2113 Female, age 91, right hemisphere 48.8
1892 Male, age 76, both hemispheres 44.3
2437 Female, age 94, left hemisphere 43.7
1940 Female, age 85, left hemisphere 29.2
Hippocampus, CA3
nTPM: 43.6
2137 Male, age 80, left hemisphere 77.5
2861 Female, age 67, both hemispheres 47.9
1867 Male, age 76, both hemispheres 41.7
2436 Male, age 74, both hemispheres 38.7
1891 Female, age 85, both hemispheres 30.6
2620 Female, age 94, left hemisphere 25.2
Parahippocampal cortex
nTPM: 45.1
2245 Female, age 91, both hemispheres 75.2
2250 Female, age 67, right hemisphere 63.9
1990 Female, age 91, right hemisphere 47.5
1933 Female, age 85, both hemispheres 42.3
2622 Female, age 67, right hemisphere 42.2
2692 Male, age 74, both hemispheres 42.1
2018 Male, age 76, both hemispheres 37.7
2693 Female, age 94, both hemispheres 34.8
1850 Male, age 80, both hemispheres 33.4
2532 Female, age 72, left hemisphere 31.8
Perirhinal gyrus
nTPM: 47.2
1847 Female, age 91, left hemisphere 71.2
2521 Female, age 94, right hemisphere 54.1
1794 Male, age 80, right hemisphere 41.9
2848 Male, age 76, right hemisphere 36.4
1841 Female, age 85, right hemisphere 32.7
Subiculum
nTPM: 39.5
2619 Male, age 74, both hemispheres 48.3
1977 Female, age 85, both hemispheres 45.5
1901 Male, age 80, both hemispheres 43.9
2042 Male, age 76, both hemispheres 36.9
2438 Female, age 94, left hemisphere 36.6
2729 Female, age 91, right hemisphere 25.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.5
Samples: 197

Max nTPM: 101.1
Min nTPM: 0.5
Std nTPM: 22.4
Median nTPM: 26.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 101.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 99.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 99.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 98.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 93.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 83.9
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 82.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 81.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 78.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 75.9
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 75.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.0
FF:10153-102I9 76 years, female 39.8
FF:10169-103B7 60 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.6
Pig sample Sample description nTPM
Subiculum
nTPM: 22.6
Samples: 4

Max nTPM: 29.5
Min nTPM: 18.1
Sample A Female 29.5
Sample B Female 20.0
Sample C Male 22.6
Sample D Male 18.1
Dorsal hippocampus
nTPM: 13.6
Samples: 4

Max nTPM: 17.4
Min nTPM: 11.9
Sample A Female 11.9
Sample B Female 17.4
Sample C Male 12.8
Sample D Male 12.3
Entorhinal cortex
nTPM: 20.4
Samples: 4

Max nTPM: 24.4
Min nTPM: 15.6
Sample A Female 23.5
Sample B Female 15.6
Sample C Male 24.4
Sample D Male 18.1
Ventral hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 24.7
Min nTPM: 12.5
Sample A Female 12.5
Sample B Female 14.2
Sample C Male 24.7
Sample D Male 15.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 22.3
Min nTPM: 18.4
Sample A Male 20.3
Sample B Male 18.4
Sample C Female 21.5
Sample D Female 22.3
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 13.5
Min nTPM: 8.4
Sample A Male 13.5
Sample B Male 12.1
Sample C Female 8.4
Sample D Female 13.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
73925724 Antisense, RP_051214_03_B11, Mouse strain C57BL/6J (56 days, male) 6.0
69528106 Antisense, RP_050421_03_B04, Mouse strain C57BL/6J (56 days, male) 4.5

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