HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:199.2 nTPM
HPA Brain:167.8 nTPM
GTEx:199.2 nTPM
FANTOM5:19.4 Scaled Tags Per Million
Pig:60.3 nTPM
Mouse:99.0 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043270Antibody HPA047226
Glial cells Not detectedNot detected
Neuronal cells MediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 167.8
Sample id Sample description nTPM
Hippocampus
nTPM: 167.8
2621 Female, age 67, right hemisphere 205.1
2529 Female, age 94, left hemisphere 196.3
1911 Female, age 85, right hemisphere 165.8
2148 Female, age 91, left hemisphere 158.6
1898 Male, age 80, left hemisphere 154.6
1855 Male, age 76, left hemisphere 126.1
Dentate gyrus
nTPM: 149.1
2531 Female, age 67, both hemispheres 182.2
2530 Female, age 94, left hemisphere 178.3
1927 Female, age 91, both hemispheres 174.8
2528 Male, age 74, both hemispheres 128.1
2010 Male, age 76, both hemispheres 119.5
2246 Female, age 85, both hemispheres 111.7
Entorhinal gyrus
nTPM: 124.9
2117 Female, age 91, right hemisphere 133.3
2613 Female, age 94, left hemisphere 131.8
2686 Male, age 75, right hemisphere 129.0
2764 Male, age 80, right hemisphere 126.5
1787 Male, age 76, left hemisphere 116.7
1938 Female, age 85, left hemisphere 112.3
Hippocampus, CA1
nTPM: 137.2
2749 Male, age 80, left hemisphere 182.1
2527 Male, age 74, both hemispheres 163.0
1873 Female, age 85, both hemispheres 131.9
2082 Female, age 91, right hemisphere 109.8
2045 Male, age 76, both hemispheres 99.2
Hippocampus, CA2
nTPM: 148.3
1963 Male, age 80, left hemisphere 271.5
2437 Female, age 94, left hemisphere 154.2
2113 Female, age 91, right hemisphere 129.5
1892 Male, age 76, both hemispheres 120.6
2249 Male, age 74, both hemispheres 117.3
1940 Female, age 85, left hemisphere 96.8
Hippocampus, CA3
nTPM: 149.2
2861 Female, age 67, both hemispheres 218.0
2137 Male, age 80, left hemisphere 180.7
2620 Female, age 94, left hemisphere 144.3
1867 Male, age 76, both hemispheres 129.0
1891 Female, age 85, both hemispheres 111.8
2436 Male, age 74, both hemispheres 111.4
Parahippocampal cortex
nTPM: 113.5
2245 Female, age 91, both hemispheres 169.6
2622 Female, age 67, right hemisphere 118.5
2018 Male, age 76, both hemispheres 117.7
2250 Female, age 67, right hemisphere 110.6
2532 Female, age 72, left hemisphere 108.8
1990 Female, age 91, right hemisphere 107.8
2692 Male, age 74, both hemispheres 106.4
2693 Female, age 94, both hemispheres 105.0
1933 Female, age 85, both hemispheres 101.8
1850 Male, age 80, both hemispheres 89.0
Perirhinal gyrus
nTPM: 102.6
1847 Female, age 91, left hemisphere 111.2
2521 Female, age 94, right hemisphere 110.0
1794 Male, age 80, right hemisphere 108.3
1841 Female, age 85, right hemisphere 96.4
2848 Male, age 76, right hemisphere 87.2
Subiculum
nTPM: 118.8
2042 Male, age 76, both hemispheres 132.3
1901 Male, age 80, both hemispheres 124.0
1977 Female, age 85, both hemispheres 118.8
2619 Male, age 74, both hemispheres 114.1
2729 Female, age 91, right hemisphere 113.6
2438 Female, age 94, left hemisphere 109.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 199.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 199.2
Samples: 197

Max nTPM: 545.5
Min nTPM: 37.7
Std nTPM: 88.7
Median nTPM: 180.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 545.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 506.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 449.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 435.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 434.1
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 429.4
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 394.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 388.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 371.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 371.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 365.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.4
FF:10169-103B7 60 years, female 21.8
FF:10153-102I9 76 years, female 17.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.3
Pig sample Sample description nTPM
Subiculum
nTPM: 53.1
Samples: 4

Max nTPM: 69.1
Min nTPM: 43.9
Sample A Female 69.1
Sample B Female 51.9
Sample C Male 47.4
Sample D Male 43.9
Dorsal hippocampus
nTPM: 57.8
Samples: 4

Max nTPM: 71.8
Min nTPM: 42.1
Sample A Female 71.8
Sample B Female 58.3
Sample C Male 58.9
Sample D Male 42.1
Entorhinal cortex
nTPM: 60.4
Samples: 4

Max nTPM: 74.5
Min nTPM: 49.2
Sample A Female 56.1
Sample B Female 61.6
Sample C Male 74.5
Sample D Male 49.2
Ventral hippocampus
nTPM: 55.4
Samples: 4

Max nTPM: 67.7
Min nTPM: 44.4
Sample A Female 50.7
Sample B Female 44.4
Sample C Male 67.7
Sample D Male 58.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 99.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 99.0
Samples: 4

Max nTPM: 106.7
Min nTPM: 92.5
Sample A Male 99.1
Sample B Male 106.7
Sample C Female 92.5
Sample D Female 97.7
Hippocampal formation
nTPM: 89.9
Samples: 4

Max nTPM: 99.1
Min nTPM: 83.2
Sample A Male 89.6
Sample B Male 83.2
Sample C Female 87.7
Sample D Female 99.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69549674 Antisense, RP_050317_04_E11, Mouse strain C57BL/6J (56 days, male) 0.2

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