HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:76.5 nTPM
HPA Brain:127.0 nTPM
GTEx:76.5 nTPM
FANTOM5:70.6 Scaled Tags Per Million
Pig:122.6 nTPM
Mouse:200.3 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA078390
Glial cells Low
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 127.0
Sample id Sample description nTPM
Hippocampus
nTPM: 86.3
1855 Male, age 76, left hemisphere 99.8
2621 Female, age 67, right hemisphere 99.7
1898 Male, age 80, left hemisphere 94.1
2148 Female, age 91, left hemisphere 82.7
1911 Female, age 85, right hemisphere 76.7
2529 Female, age 94, left hemisphere 64.6
Dentate gyrus
nTPM: 91.7
1927 Female, age 91, both hemispheres 111.8
2531 Female, age 67, both hemispheres 99.8
2530 Female, age 94, left hemisphere 94.9
2010 Male, age 76, both hemispheres 88.5
2246 Female, age 85, both hemispheres 84.0
2528 Male, age 74, both hemispheres 70.7
Entorhinal gyrus
nTPM: 102.5
2613 Female, age 94, left hemisphere 164.5
1938 Female, age 85, left hemisphere 114.2
2764 Male, age 80, right hemisphere 109.7
1787 Male, age 76, left hemisphere 92.0
2686 Male, age 75, right hemisphere 83.7
2117 Female, age 91, right hemisphere 50.6
Hippocampus, CA1
nTPM: 115.7
2749 Male, age 80, left hemisphere 183.4
2045 Male, age 76, both hemispheres 110.2
2527 Male, age 74, both hemispheres 97.7
2082 Female, age 91, right hemisphere 93.8
1873 Female, age 85, both hemispheres 93.4
Hippocampus, CA2
nTPM: 100.6
1892 Male, age 76, both hemispheres 118.1
1940 Female, age 85, left hemisphere 107.7
2437 Female, age 94, left hemisphere 106.6
2249 Male, age 74, both hemispheres 93.9
2113 Female, age 91, right hemisphere 93.7
1963 Male, age 80, left hemisphere 83.8
Hippocampus, CA3
nTPM: 107.7
2137 Male, age 80, left hemisphere 153.9
2620 Female, age 94, left hemisphere 142.4
2861 Female, age 67, both hemispheres 112.5
1867 Male, age 76, both hemispheres 100.2
2436 Male, age 74, both hemispheres 77.8
1891 Female, age 85, both hemispheres 59.4
Parahippocampal cortex
nTPM: 106.0
2245 Female, age 91, both hemispheres 145.1
2250 Female, age 67, right hemisphere 121.4
1850 Male, age 80, both hemispheres 117.2
2622 Female, age 67, right hemisphere 114.9
2693 Female, age 94, both hemispheres 110.4
1933 Female, age 85, both hemispheres 106.3
2532 Female, age 72, left hemisphere 103.7
1990 Female, age 91, right hemisphere 95.4
2018 Male, age 76, both hemispheres 83.7
2692 Male, age 74, both hemispheres 61.9
Perirhinal gyrus
nTPM: 127.0
1847 Female, age 91, left hemisphere 162.0
2521 Female, age 94, right hemisphere 133.1
1794 Male, age 80, right hemisphere 131.2
1841 Female, age 85, right hemisphere 114.8
2848 Male, age 76, right hemisphere 94.0
Subiculum
nTPM: 86.9
2438 Female, age 94, left hemisphere 130.7
1901 Male, age 80, both hemispheres 103.1
1977 Female, age 85, both hemispheres 94.2
2042 Male, age 76, both hemispheres 78.7
2619 Male, age 74, both hemispheres 65.4
2729 Female, age 91, right hemisphere 49.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 76.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.5
Samples: 197

Max nTPM: 293.7
Min nTPM: 1.8
Std nTPM: 52.5
Median nTPM: 73.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 293.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 229.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 211.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 207.9
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 205.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 201.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 197.8
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 196.5
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 191.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 183.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 182.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.6
FF:10169-103B7 60 years, female 94.5
FF:10153-102I9 76 years, female 46.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 122.6
Pig sample Sample description nTPM
Subiculum
nTPM: 122.6
Samples: 4

Max nTPM: 156.7
Min nTPM: 101.6
Sample A Female 156.7
Sample B Female 106.9
Sample C Male 125.3
Sample D Male 101.6
Dorsal hippocampus
nTPM: 118.6
Samples: 4

Max nTPM: 135.4
Min nTPM: 90.1
Sample A Female 132.2
Sample B Female 135.4
Sample C Male 90.1
Sample D Male 116.8
Entorhinal cortex
nTPM: 120.3
Samples: 4

Max nTPM: 145.9
Min nTPM: 101.7
Sample A Female 145.9
Sample B Female 101.7
Sample C Male 123.4
Sample D Male 110.3
Ventral hippocampus
nTPM: 118.8
Samples: 4

Max nTPM: 160.1
Min nTPM: 93.5
Sample A Female 111.5
Sample B Female 93.5
Sample C Male 160.1
Sample D Male 110.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 200.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 200.3
Samples: 4

Max nTPM: 216.6
Min nTPM: 184.8
Sample A Male 195.9
Sample B Male 216.6
Sample C Female 184.8
Sample D Female 203.7
Hippocampal formation
nTPM: 156.3
Samples: 4

Max nTPM: 173.3
Min nTPM: 141.0
Sample A Male 173.3
Sample B Male 145.1
Sample C Female 141.0
Sample D Female 165.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
1029 Antisense, RP_Baylor_103190, Mouse strain C57BL/6J (56 days, male) 0.8
1030 Antisense, RP_Baylor_103190, Mouse strain C57BL/6J (56 days, male) 0.1
1031 Sense, RPS_Baylor_37076, Mouse strain C57BL/6J (56 days, male) 0.1

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