HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:70.3 nTPM
HPA Brain:59.1 nTPM
GTEx:70.3 nTPM
FANTOM5:18.7 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:32.8 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051806
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.1
Sample id Sample description nTPM
Hippocampus
nTPM: 51.1
2529 Female, age 94, left hemisphere 56.8
1911 Female, age 85, right hemisphere 55.4
1898 Male, age 80, left hemisphere 54.7
2621 Female, age 67, right hemisphere 49.3
2148 Female, age 91, left hemisphere 46.6
1855 Male, age 76, left hemisphere 44.0
Dentate gyrus
nTPM: 52.4
2530 Female, age 94, left hemisphere 68.3
2010 Male, age 76, both hemispheres 56.3
2528 Male, age 74, both hemispheres 53.9
2246 Female, age 85, both hemispheres 47.7
1927 Female, age 91, both hemispheres 44.6
2531 Female, age 67, both hemispheres 43.3
Entorhinal gyrus
nTPM: 59.1
2764 Male, age 80, right hemisphere 71.7
2117 Female, age 91, right hemisphere 65.8
2613 Female, age 94, left hemisphere 61.8
1787 Male, age 76, left hemisphere 52.8
2686 Male, age 75, right hemisphere 51.8
1938 Female, age 85, left hemisphere 50.8
Hippocampus, CA1
nTPM: 49.8
2749 Male, age 80, left hemisphere 58.1
2527 Male, age 74, both hemispheres 53.5
2082 Female, age 91, right hemisphere 48.7
1873 Female, age 85, both hemispheres 48.2
2045 Male, age 76, both hemispheres 40.2
Hippocampus, CA2
nTPM: 53.8
2249 Male, age 74, both hemispheres 58.5
1963 Male, age 80, left hemisphere 57.0
1940 Female, age 85, left hemisphere 55.6
2437 Female, age 94, left hemisphere 54.1
2113 Female, age 91, right hemisphere 52.0
1892 Male, age 76, both hemispheres 45.6
Hippocampus, CA3
nTPM: 45.9
2620 Female, age 94, left hemisphere 54.6
1891 Female, age 85, both hemispheres 52.6
1867 Male, age 76, both hemispheres 43.8
2137 Male, age 80, left hemisphere 42.7
2436 Male, age 74, both hemispheres 42.5
2861 Female, age 67, both hemispheres 39.2
Parahippocampal cortex
nTPM: 51.2
2532 Female, age 72, left hemisphere 58.5
2692 Male, age 74, both hemispheres 58.4
1990 Female, age 91, right hemisphere 55.3
1933 Female, age 85, both hemispheres 55.0
2245 Female, age 91, both hemispheres 52.8
2018 Male, age 76, both hemispheres 51.1
1850 Male, age 80, both hemispheres 48.8
2250 Female, age 67, right hemisphere 47.0
2693 Female, age 94, both hemispheres 45.0
2622 Female, age 67, right hemisphere 39.9
Perirhinal gyrus
nTPM: 51.7
1794 Male, age 80, right hemisphere 57.4
2521 Female, age 94, right hemisphere 51.2
1841 Female, age 85, right hemisphere 50.7
2848 Male, age 76, right hemisphere 50.5
1847 Female, age 91, left hemisphere 48.9
Subiculum
nTPM: 56.2
1977 Female, age 85, both hemispheres 64.3
2042 Male, age 76, both hemispheres 61.9
2619 Male, age 74, both hemispheres 61.4
1901 Male, age 80, both hemispheres 58.0
2729 Female, age 91, right hemisphere 48.0
2438 Female, age 94, left hemisphere 43.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 70.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 70.3
Samples: 197

Max nTPM: 187.8
Min nTPM: 7.3
Std nTPM: 22.2
Median nTPM: 67.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 187.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 165.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 140.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 133.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 128.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 117.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 113.4
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 106.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 106.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 106.1
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 105.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.7
FF:10153-102I9 76 years, female 22.9
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.9
Pig sample Sample description nTPM
Subiculum
nTPM: 10.1
Samples: 4

Max nTPM: 12.7
Min nTPM: 7.4
Sample A Female 12.7
Sample B Female 10.9
Sample C Male 7.4
Sample D Male 9.5
Dorsal hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 27.8
Min nTPM: 11.3
Sample A Female 27.8
Sample B Female 13.8
Sample C Male 18.8
Sample D Male 11.3
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 10.9
Min nTPM: 8.0
Sample A Female 9.4
Sample B Female 10.9
Sample C Male 10.7
Sample D Male 8.0
Ventral hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 15.7
Min nTPM: 10.3
Sample A Female 15.4
Sample B Female 10.3
Sample C Male 14.2
Sample D Male 15.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.6
Samples: 4

Max nTPM: 24.2
Min nTPM: 15.8
Sample A Male 18.6
Sample B Male 15.9
Sample C Female 24.2
Sample D Female 15.8
Hippocampal formation
nTPM: 32.8
Samples: 4

Max nTPM: 44.2
Min nTPM: 24.0
Sample A Male 26.8
Sample B Male 24.0
Sample C Female 44.2
Sample D Female 36.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
69262341 Antisense, RP_050303_02_B11, Mouse strain C57BL/6J (56 days, male) 1.7

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