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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
229.5
nTPM
Monaco:
203.6
nTPM
Schmiedel:
631.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
229.5
HPA sample
nTPM
gdT-cell nTPM: 57.3
Samples: 6
Max nTPM: 64.7
Min nTPM: 44.4
P10809_1007
56.1
P10809_1022
44.4
P10809_1041
54.0
P10809_1060
64.7
P10809_1077
64.6
P10809_1098
59.8
MAIT T-cell nTPM: 36.0
Samples: 6
Max nTPM: 58.2
Min nTPM: 25.4
P10809_1006
28.8
P10809_1024
27.5
P10809_1043
25.4
P10809_1062
35.9
P10809_1083
40.3
P10809_1097
58.2
Memory CD4 T-cell nTPM: 72.6
Samples: 6
Max nTPM: 86.1
Min nTPM: 56.3
P10809_1014
62.0
P10809_1026
76.8
P10809_1045
56.3
P10809_1064
86.1
P10809_1086
76.2
P10809_1113
78.1
Memory CD8 T-cell nTPM: 48.7
Samples: 5
Max nTPM: 59.2
Min nTPM: 42.9
P10809_1012
47.1
P10809_1027
48.0
P10809_1046
42.9
P10809_1065
59.2
P10809_1111
46.3
Naive CD4 T-cell nTPM: 40.9
Samples: 6
Max nTPM: 48.8
Min nTPM: 37.4
P10809_1015
39.7
P10809_1030
38.4
P10809_1049
43.3
P10809_1068
37.8
P10809_1085
48.8
P10809_1112
37.4
Naive CD8 T-cell nTPM: 49.8
Samples: 6
Max nTPM: 69.7
Min nTPM: 35.0
P10809_1016
39.5
P10809_1031
52.1
P10809_1050
48.9
P10809_1069
69.7
P10809_1087
53.8
P10809_1110
35.0
T-reg nTPM: 229.5
Samples: 6
Max nTPM: 268.8
Min nTPM: 186.0
P10809_1018
212.2
P10809_1037
224.1
P10809_1056
186.0
P10809_1075
241.6
P10809_1094
244.5
P10809_1106
268.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
203.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 117.4
Samples: 4
Max nTPM: 161.1
Min nTPM: 63.3
RHH5202_R3573
143.0
RHH5230_R3602
102.2
RHH5259_R3631
63.3
RHH5288_R3660
161.1
Effector memory CD8 T-cell nTPM: 141.2
Samples: 4
Max nTPM: 230.3
Min nTPM: 78.1
RHH5203_R3574
230.3
RHH5231_R3603
167.1
RHH5260_R3632
78.1
RHH5289_R3661
89.4
MAIT T-cell nTPM: 110.9
Samples: 4
Max nTPM: 160.0
Min nTPM: 88.3
RHH5233_R3605
160.0
RHH5205_R3576
88.3
RHH5262_R3634
95.1
RHH5297_R3663
100.3
Memory CD4 T-cell TFH nTPM: 182.7
Samples: 4
Max nTPM: 211.0
Min nTPM: 145.8
RHH5300_R3666
191.4
RHH5236_R3608
211.0
RHH5265_R3637
145.8
RHH5208_R3579
182.4
Memory CD4 T-cell Th1 nTPM: 141.1
Samples: 4
Max nTPM: 200.8
Min nTPM: 98.0
RHH5210_R3581
136.0
RHH5302_R3668
200.8
RHH5238_R3610
129.4
RHH5267_R3639
98.0
Memory CD4 T-cell Th1/Th17 nTPM: 145.4
Samples: 4
Max nTPM: 234.2
Min nTPM: 68.5
RHH5303_R3669
234.2
RHH5211_R3582
179.8
RHH5239_R3611
68.5
RHH5268_R3640
99.1
Memory CD4 T-cell Th17 nTPM: 106.2
Samples: 4
Max nTPM: 189.6
Min nTPM: 60.5
RHH5304_R3670
112.3
RHH5212_R3583
189.6
RHH5240_R3612
60.5
RHH5269_R3641
62.5
Memory CD4 T-cell Th2 nTPM: 173.0
Samples: 4
Max nTPM: 206.7
Min nTPM: 130.8
RHH5305_R3671
153.6
RHH5213_R3584
200.7
RHH5241_R3613
206.7
RHH5270_R3642
130.8
Naive CD4 T-cell nTPM: 84.6
Samples: 4
Max nTPM: 108.7
Min nTPM: 53.8
RHH5306_R3672
92.8
RHH5214_R3585
83.1
RHH5242_R3614
108.7
RHH5271_R3643
53.8
Naive CD8 T-cell nTPM: 83.1
Samples: 4
Max nTPM: 100.9
Min nTPM: 68.9
RHH5201_R3572
70.4
RHH5229_R3601
92.1
RHH5258_R3630
100.9
RHH5287_R3659
68.9
Non-Vd2 gdTCR nTPM: 147.8
Samples: 4
Max nTPM: 179.6
Min nTPM: 120.6
RHH5235_R3607
120.6
RHH5264_R3636
158.2
RHH5207_R3578
132.6
RHH5299_R3665
179.6
T-reg nTPM: 203.6
Samples: 4
Max nTPM: 281.3
Min nTPM: 128.1
RHH5301_R3667
281.3
RHH5237_R3609
253.5
RHH5266_R3638
128.1
RHH5209_R3580
151.4
Terminal effector memory CD4 T-cell nTPM: 122.4
Samples: 2
Max nTPM: 154.5
Min nTPM: 90.2
RHH5243_R3615
90.2
RHH5272_R3644
154.5
Terminal effector memory CD8 T-cell nTPM: 157.1
Samples: 4
Max nTPM: 219.8
Min nTPM: 121.8
RHH5232_R3604
162.0
RHH5204_R3575
219.8
RHH5261_R3633
124.9
RHH5296_R3662
121.8
Vd2 gdTCR nTPM: 157.6
Samples: 4
Max nTPM: 246.2
Min nTPM: 98.4
RHH5234_R3606
126.1
RHH5206_R3577
246.2
RHH5263_R3635
98.4
RHH5298_R3664
159.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
