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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
154.7
nTPM
Monaco:
189.0
nTPM
Schmiedel:
31.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
154.7
HPA sample
nTPM
gdT-cell nTPM: 100.5
Samples: 6
Max nTPM: 111.6
Min nTPM: 79.0
P10809_1007
79.0
P10809_1022
111.6
P10809_1041
105.6
P10809_1060
104.6
P10809_1077
96.5
P10809_1098
105.4
MAIT T-cell nTPM: 93.5
Samples: 6
Max nTPM: 107.3
Min nTPM: 82.6
P10809_1006
82.6
P10809_1024
103.5
P10809_1043
107.3
P10809_1062
87.8
P10809_1083
89.8
P10809_1097
90.1
Memory CD4 T-cell nTPM: 105.2
Samples: 6
Max nTPM: 122.2
Min nTPM: 92.1
P10809_1014
92.1
P10809_1026
122.2
P10809_1045
106.2
P10809_1064
101.9
P10809_1086
110.7
P10809_1113
97.9
Memory CD8 T-cell nTPM: 94.0
Samples: 5
Max nTPM: 114.3
Min nTPM: 68.0
P10809_1012
96.1
P10809_1027
68.0
P10809_1046
108.7
P10809_1065
114.3
P10809_1111
82.9
Naive CD4 T-cell nTPM: 93.8
Samples: 6
Max nTPM: 111.5
Min nTPM: 62.6
P10809_1015
62.6
P10809_1030
98.8
P10809_1049
111.5
P10809_1068
100.5
P10809_1085
90.2
P10809_1112
99.4
Naive CD8 T-cell nTPM: 84.3
Samples: 6
Max nTPM: 107.4
Min nTPM: 71.0
P10809_1016
76.0
P10809_1031
71.0
P10809_1050
82.8
P10809_1069
107.4
P10809_1087
95.8
P10809_1110
72.5
T-reg nTPM: 154.7
Samples: 6
Max nTPM: 187.7
Min nTPM: 111.5
P10809_1018
111.5
P10809_1037
145.4
P10809_1056
172.4
P10809_1075
160.9
P10809_1094
187.7
P10809_1106
150.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
189.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 125.0
Samples: 4
Max nTPM: 185.8
Min nTPM: 84.3
RHH5202_R3573
126.8
RHH5230_R3602
103.2
RHH5259_R3631
84.3
RHH5288_R3660
185.8
Effector memory CD8 T-cell nTPM: 135.8
Samples: 4
Max nTPM: 165.5
Min nTPM: 104.6
RHH5203_R3574
160.5
RHH5231_R3603
165.5
RHH5260_R3632
104.6
RHH5289_R3661
112.4
MAIT T-cell nTPM: 150.5
Samples: 4
Max nTPM: 218.7
Min nTPM: 101.3
RHH5233_R3605
134.5
RHH5205_R3576
101.3
RHH5262_R3634
147.6
RHH5297_R3663
218.7
Memory CD4 T-cell TFH nTPM: 153.2
Samples: 4
Max nTPM: 192.2
Min nTPM: 135.4
RHH5300_R3666
192.2
RHH5236_R3608
139.9
RHH5265_R3637
135.4
RHH5208_R3579
145.4
Memory CD4 T-cell Th1 nTPM: 132.0
Samples: 4
Max nTPM: 236.5
Min nTPM: 71.8
RHH5210_R3581
121.2
RHH5302_R3668
236.5
RHH5238_R3610
71.8
RHH5267_R3639
98.6
Memory CD4 T-cell Th1/Th17 nTPM: 156.0
Samples: 4
Max nTPM: 269.2
Min nTPM: 85.4
RHH5303_R3669
269.2
RHH5211_R3582
165.7
RHH5239_R3611
85.4
RHH5268_R3640
103.8
Memory CD4 T-cell Th17 nTPM: 117.3
Samples: 4
Max nTPM: 154.5
Min nTPM: 77.1
RHH5304_R3670
154.5
RHH5212_R3583
153.7
RHH5240_R3612
84.0
RHH5269_R3641
77.1
Memory CD4 T-cell Th2 nTPM: 142.5
Samples: 4
Max nTPM: 161.5
Min nTPM: 129.1
RHH5305_R3671
161.5
RHH5213_R3584
142.6
RHH5241_R3613
136.6
RHH5270_R3642
129.1
Naive CD4 T-cell nTPM: 118.3
Samples: 4
Max nTPM: 144.8
Min nTPM: 92.2
RHH5306_R3672
144.8
RHH5214_R3585
139.4
RHH5242_R3614
92.2
RHH5271_R3643
96.8
Naive CD8 T-cell nTPM: 102.5
Samples: 4
Max nTPM: 128.6
Min nTPM: 64.7
RHH5201_R3572
124.3
RHH5229_R3601
64.7
RHH5258_R3630
128.6
RHH5287_R3659
92.4
Non-Vd2 gdTCR nTPM: 157.0
Samples: 4
Max nTPM: 201.4
Min nTPM: 76.1
RHH5235_R3607
76.1
RHH5264_R3636
189.4
RHH5207_R3578
160.9
RHH5299_R3665
201.4
T-reg nTPM: 151.5
Samples: 4
Max nTPM: 229.0
Min nTPM: 114.1
RHH5301_R3667
229.0
RHH5237_R3609
142.8
RHH5266_R3638
114.1
RHH5209_R3580
120.0
Terminal effector memory CD4 T-cell nTPM: 134.5
Samples: 2
Max nTPM: 167.4
Min nTPM: 101.5
RHH5243_R3615
101.5
RHH5272_R3644
167.4
Terminal effector memory CD8 T-cell nTPM: 189.0
Samples: 4
Max nTPM: 260.2
Min nTPM: 118.3
RHH5232_R3604
170.6
RHH5204_R3575
260.2
RHH5261_R3633
118.3
RHH5296_R3662
207.0
Vd2 gdTCR nTPM: 161.8
Samples: 4
Max nTPM: 222.5
Min nTPM: 108.3
RHH5234_R3606
130.1
RHH5206_R3577
186.1
RHH5263_R3635
108.3
RHH5298_R3664
222.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
