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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
42.7
nTPM
Monaco:
150.0
nTPM
Schmiedel:
177.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
42.7
HPA sample
nTPM
gdT-cell nTPM: 38.0
Samples: 6
Max nTPM: 46.7
Min nTPM: 29.1
P10809_1007
46.7
P10809_1022
40.6
P10809_1041
29.1
P10809_1060
38.5
P10809_1077
32.4
P10809_1098
40.6
MAIT T-cell nTPM: 42.7
Samples: 6
Max nTPM: 55.1
Min nTPM: 27.9
P10809_1006
46.8
P10809_1024
40.0
P10809_1043
55.1
P10809_1062
39.4
P10809_1083
27.9
P10809_1097
47.0
Memory CD4 T-cell nTPM: 31.9
Samples: 6
Max nTPM: 39.5
Min nTPM: 23.4
P10809_1014
39.5
P10809_1026
31.7
P10809_1045
35.4
P10809_1064
27.9
P10809_1086
23.4
P10809_1113
33.2
Memory CD8 T-cell nTPM: 36.4
Samples: 5
Max nTPM: 51.3
Min nTPM: 25.9
P10809_1012
43.5
P10809_1027
25.9
P10809_1046
51.3
P10809_1065
31.2
P10809_1111
30.2
Naive CD4 T-cell nTPM: 30.4
Samples: 6
Max nTPM: 37.7
Min nTPM: 23.9
P10809_1015
33.9
P10809_1030
28.0
P10809_1049
29.0
P10809_1068
23.9
P10809_1085
37.7
P10809_1112
29.6
Naive CD8 T-cell nTPM: 33.2
Samples: 6
Max nTPM: 40.2
Min nTPM: 26.5
P10809_1016
40.2
P10809_1031
33.0
P10809_1050
32.1
P10809_1069
37.4
P10809_1087
29.8
P10809_1110
26.5
T-reg nTPM: 37.6
Samples: 6
Max nTPM: 50.0
Min nTPM: 23.2
P10809_1018
48.7
P10809_1037
30.3
P10809_1056
50.0
P10809_1075
23.2
P10809_1094
39.8
P10809_1106
33.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
150.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 143.5
Samples: 4
Max nTPM: 160.9
Min nTPM: 116.9
RHH5202_R3573
157.8
RHH5230_R3602
160.9
RHH5259_R3631
116.9
RHH5288_R3660
138.5
Effector memory CD8 T-cell nTPM: 133.5
Samples: 4
Max nTPM: 158.8
Min nTPM: 89.3
RHH5203_R3574
131.3
RHH5231_R3603
158.8
RHH5260_R3632
154.4
RHH5289_R3661
89.3
MAIT T-cell nTPM: 149.6
Samples: 4
Max nTPM: 175.4
Min nTPM: 124.4
RHH5233_R3605
175.4
RHH5205_R3576
159.6
RHH5262_R3634
138.8
RHH5297_R3663
124.4
Memory CD4 T-cell TFH nTPM: 114.5
Samples: 4
Max nTPM: 131.8
Min nTPM: 98.8
RHH5300_R3666
98.8
RHH5236_R3608
110.4
RHH5265_R3637
131.8
RHH5208_R3579
116.9
Memory CD4 T-cell Th1 nTPM: 111.3
Samples: 4
Max nTPM: 118.2
Min nTPM: 105.6
RHH5210_R3581
112.9
RHH5302_R3668
118.2
RHH5238_R3610
108.4
RHH5267_R3639
105.6
Memory CD4 T-cell Th1/Th17 nTPM: 131.0
Samples: 4
Max nTPM: 145.2
Min nTPM: 113.7
RHH5303_R3669
129.9
RHH5211_R3582
113.7
RHH5239_R3611
145.2
RHH5268_R3640
135.1
Memory CD4 T-cell Th17 nTPM: 137.5
Samples: 4
Max nTPM: 176.0
Min nTPM: 87.4
RHH5304_R3670
149.6
RHH5212_R3583
87.4
RHH5240_R3612
176.0
RHH5269_R3641
137.1
Memory CD4 T-cell Th2 nTPM: 118.7
Samples: 4
Max nTPM: 141.3
Min nTPM: 96.3
RHH5305_R3671
97.8
RHH5213_R3584
96.3
RHH5241_R3613
139.5
RHH5270_R3642
141.3
Naive CD4 T-cell nTPM: 109.1
Samples: 4
Max nTPM: 126.2
Min nTPM: 86.1
RHH5306_R3672
116.5
RHH5214_R3585
86.1
RHH5242_R3614
107.7
RHH5271_R3643
126.2
Naive CD8 T-cell nTPM: 142.9
Samples: 4
Max nTPM: 175.3
Min nTPM: 129.9
RHH5201_R3572
175.3
RHH5229_R3601
134.0
RHH5258_R3630
132.2
RHH5287_R3659
129.9
Non-Vd2 gdTCR nTPM: 150.0
Samples: 4
Max nTPM: 185.6
Min nTPM: 105.2
RHH5235_R3607
185.6
RHH5264_R3636
177.6
RHH5207_R3578
131.6
RHH5299_R3665
105.2
T-reg nTPM: 104.3
Samples: 4
Max nTPM: 146.7
Min nTPM: 85.5
RHH5301_R3667
91.6
RHH5237_R3609
93.5
RHH5266_R3638
146.7
RHH5209_R3580
85.5
Terminal effector memory CD4 T-cell nTPM: 148.1
Samples: 2
Max nTPM: 150.8
Min nTPM: 145.3
RHH5243_R3615
145.3
RHH5272_R3644
150.8
Terminal effector memory CD8 T-cell nTPM: 131.0
Samples: 4
Max nTPM: 162.3
Min nTPM: 103.2
RHH5232_R3604
162.3
RHH5204_R3575
103.2
RHH5261_R3633
127.6
RHH5296_R3662
130.8
Vd2 gdTCR nTPM: 144.7
Samples: 4
Max nTPM: 179.4
Min nTPM: 123.6
RHH5234_R3606
143.3
RHH5206_R3577
132.5
RHH5263_R3635
179.4
RHH5298_R3664
123.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
