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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
16.8
nTPM
Monaco:
90.9
nTPM
Schmiedel:
83.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.8
HPA sample
nTPM
gdT-cell nTPM: 14.7
Samples: 6
Max nTPM: 25.3
Min nTPM: 6.3
P10809_1007
13.4
P10809_1022
17.7
P10809_1041
9.9
P10809_1060
25.3
P10809_1077
15.4
P10809_1098
6.3
MAIT T-cell nTPM: 16.8
Samples: 6
Max nTPM: 23.3
Min nTPM: 12.0
P10809_1006
13.9
P10809_1024
14.4
P10809_1043
21.1
P10809_1062
23.3
P10809_1083
16.3
P10809_1097
12.0
Memory CD4 T-cell nTPM: 13.3
Samples: 6
Max nTPM: 15.7
Min nTPM: 10.3
P10809_1014
12.4
P10809_1026
14.2
P10809_1045
15.7
P10809_1064
13.1
P10809_1086
14.0
P10809_1113
10.3
Memory CD8 T-cell nTPM: 11.7
Samples: 5
Max nTPM: 15.2
Min nTPM: 8.5
P10809_1012
15.2
P10809_1027
8.5
P10809_1046
11.1
P10809_1065
15.0
P10809_1111
8.7
Naive CD4 T-cell nTPM: 14.6
Samples: 6
Max nTPM: 20.5
Min nTPM: 10.3
P10809_1015
14.5
P10809_1030
13.9
P10809_1049
16.9
P10809_1068
20.5
P10809_1085
11.6
P10809_1112
10.3
Naive CD8 T-cell nTPM: 11.7
Samples: 6
Max nTPM: 14.9
Min nTPM: 4.6
P10809_1016
14.7
P10809_1031
14.9
P10809_1050
14.9
P10809_1069
11.7
P10809_1087
9.5
P10809_1110
4.6
T-reg nTPM: 13.4
Samples: 6
Max nTPM: 21.8
Min nTPM: 8.4
P10809_1018
8.4
P10809_1037
11.5
P10809_1056
12.8
P10809_1075
21.8
P10809_1094
11.8
P10809_1106
14.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
90.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 84.5
Samples: 4
Max nTPM: 100.0
Min nTPM: 72.8
RHH5202_R3573
75.3
RHH5230_R3602
100.0
RHH5259_R3631
72.8
RHH5288_R3660
89.8
Effector memory CD8 T-cell nTPM: 53.7
Samples: 4
Max nTPM: 62.1
Min nTPM: 40.0
RHH5203_R3574
57.2
RHH5231_R3603
40.0
RHH5260_R3632
55.6
RHH5289_R3661
62.1
MAIT T-cell nTPM: 66.2
Samples: 4
Max nTPM: 75.3
Min nTPM: 57.7
RHH5233_R3605
65.3
RHH5205_R3576
75.3
RHH5262_R3634
57.7
RHH5297_R3663
66.4
Memory CD4 T-cell TFH nTPM: 69.2
Samples: 4
Max nTPM: 81.6
Min nTPM: 53.0
RHH5300_R3666
53.0
RHH5236_R3608
63.5
RHH5265_R3637
78.6
RHH5208_R3579
81.6
Memory CD4 T-cell Th1 nTPM: 81.5
Samples: 4
Max nTPM: 105.3
Min nTPM: 54.9
RHH5210_R3581
83.8
RHH5302_R3668
54.9
RHH5238_R3610
82.1
RHH5267_R3639
105.3
Memory CD4 T-cell Th1/Th17 nTPM: 64.5
Samples: 4
Max nTPM: 75.2
Min nTPM: 55.1
RHH5303_R3669
63.7
RHH5211_R3582
63.8
RHH5239_R3611
75.2
RHH5268_R3640
55.1
Memory CD4 T-cell Th17 nTPM: 68.1
Samples: 4
Max nTPM: 85.4
Min nTPM: 52.6
RHH5304_R3670
53.7
RHH5212_R3583
80.5
RHH5240_R3612
52.6
RHH5269_R3641
85.4
Memory CD4 T-cell Th2 nTPM: 67.5
Samples: 4
Max nTPM: 97.0
Min nTPM: 34.3
RHH5305_R3671
34.3
RHH5213_R3584
63.9
RHH5241_R3613
97.0
RHH5270_R3642
74.6
Naive CD4 T-cell nTPM: 77.0
Samples: 4
Max nTPM: 110.9
Min nTPM: 62.5
RHH5306_R3672
62.5
RHH5214_R3585
70.3
RHH5242_R3614
110.9
RHH5271_R3643
64.3
Naive CD8 T-cell nTPM: 90.9
Samples: 4
Max nTPM: 114.5
Min nTPM: 66.8
RHH5201_R3572
114.5
RHH5229_R3601
97.0
RHH5258_R3630
85.4
RHH5287_R3659
66.8
Non-Vd2 gdTCR nTPM: 65.0
Samples: 4
Max nTPM: 92.8
Min nTPM: 39.5
RHH5235_R3607
92.8
RHH5264_R3636
39.5
RHH5207_R3578
55.3
RHH5299_R3665
72.3
T-reg nTPM: 67.2
Samples: 4
Max nTPM: 71.2
Min nTPM: 59.7
RHH5301_R3667
59.7
RHH5237_R3609
68.0
RHH5266_R3638
69.9
RHH5209_R3580
71.2
Terminal effector memory CD4 T-cell nTPM: 78.1
Samples: 2
Max nTPM: 81.7
Min nTPM: 74.4
RHH5243_R3615
74.4
RHH5272_R3644
81.7
Terminal effector memory CD8 T-cell nTPM: 73.7
Samples: 4
Max nTPM: 80.2
Min nTPM: 64.9
RHH5232_R3604
72.8
RHH5204_R3575
80.2
RHH5261_R3633
77.0
RHH5296_R3662
64.9
Vd2 gdTCR nTPM: 65.2
Samples: 4
Max nTPM: 79.6
Min nTPM: 53.6
RHH5234_R3606
79.6
RHH5206_R3577
58.3
RHH5263_R3635
53.6
RHH5298_R3664
69.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
