HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:687.0 nTPM
HPA Brain:256.6 nTPM
GTEx:687.0 nTPM
FANTOM5:208.0 Scaled Tags Per Million
Pig:248.8 nTPM
Mouse:396.9 nTPM
Allen mouse:22.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047153
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 256.6
Sample id Sample description nTPM
Hippocampus
nTPM: 256.6
2529 Female, age 94, left hemisphere 300.6
1898 Male, age 80, left hemisphere 299.5
2621 Female, age 67, right hemisphere 260.7
1911 Female, age 85, right hemisphere 234.2
1855 Male, age 76, left hemisphere 229.3
2148 Female, age 91, left hemisphere 215.1
Dentate gyrus
nTPM: 234.1
2530 Female, age 94, left hemisphere 299.5
2010 Male, age 76, both hemispheres 258.9
2246 Female, age 85, both hemispheres 232.0
2531 Female, age 67, both hemispheres 222.5
1927 Female, age 91, both hemispheres 214.8
2528 Male, age 74, both hemispheres 177.1
Entorhinal gyrus
nTPM: 240.6
2686 Male, age 75, right hemisphere 286.0
2117 Female, age 91, right hemisphere 245.9
1787 Male, age 76, left hemisphere 243.4
2764 Male, age 80, right hemisphere 240.5
1938 Female, age 85, left hemisphere 230.5
2613 Female, age 94, left hemisphere 197.4
Hippocampus, CA1
nTPM: 241.2
1873 Female, age 85, both hemispheres 262.3
2045 Male, age 76, both hemispheres 260.7
2749 Male, age 80, left hemisphere 239.5
2082 Female, age 91, right hemisphere 232.5
2527 Male, age 74, both hemispheres 210.8
Hippocampus, CA2
nTPM: 222.6
2437 Female, age 94, left hemisphere 251.6
1963 Male, age 80, left hemisphere 251.4
1892 Male, age 76, both hemispheres 239.0
2113 Female, age 91, right hemisphere 216.8
1940 Female, age 85, left hemisphere 192.9
2249 Male, age 74, both hemispheres 183.9
Hippocampus, CA3
nTPM: 223.2
2861 Female, age 67, both hemispheres 261.1
1867 Male, age 76, both hemispheres 247.4
1891 Female, age 85, both hemispheres 243.0
2137 Male, age 80, left hemisphere 215.6
2436 Male, age 74, both hemispheres 188.7
2620 Female, age 94, left hemisphere 183.2
Parahippocampal cortex
nTPM: 230.5
2018 Male, age 76, both hemispheres 312.4
2250 Female, age 67, right hemisphere 267.1
2245 Female, age 91, both hemispheres 241.3
1850 Male, age 80, both hemispheres 239.4
1933 Female, age 85, both hemispheres 238.1
2532 Female, age 72, left hemisphere 222.8
1990 Female, age 91, right hemisphere 222.2
2692 Male, age 74, both hemispheres 193.7
2622 Female, age 67, right hemisphere 191.1
2693 Female, age 94, both hemispheres 176.8
Perirhinal gyrus
nTPM: 246.4
1847 Female, age 91, left hemisphere 284.0
1841 Female, age 85, right hemisphere 283.1
1794 Male, age 80, right hemisphere 244.4
2848 Male, age 76, right hemisphere 212.9
2521 Female, age 94, right hemisphere 207.3
Subiculum
nTPM: 240.2
2042 Male, age 76, both hemispheres 300.6
1977 Female, age 85, both hemispheres 257.3
1901 Male, age 80, both hemispheres 240.7
2438 Female, age 94, left hemisphere 240.3
2619 Male, age 74, both hemispheres 215.1
2729 Female, age 91, right hemisphere 187.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 687.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 687.0
Samples: 197

Max nTPM: 2049.6
Min nTPM: 256.4
Std nTPM: 259.3
Median nTPM: 635.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2049.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1637.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1455.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1437.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1342.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 1329.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1314.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1265.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 1212.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 1181.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1176.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 208.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 208.0
FF:10169-103B7 60 years, female 232.6
FF:10153-102I9 76 years, female 183.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 248.8
Pig sample Sample description nTPM
Subiculum
nTPM: 213.8
Samples: 4

Max nTPM: 286.9
Min nTPM: 175.6
Sample A Female 286.9
Sample B Female 206.5
Sample C Male 175.6
Sample D Male 186.1
Dorsal hippocampus
nTPM: 248.8
Samples: 4

Max nTPM: 322.9
Min nTPM: 171.6
Sample A Female 322.9
Sample B Female 207.4
Sample C Male 293.4
Sample D Male 171.6
Entorhinal cortex
nTPM: 208.4
Samples: 4

Max nTPM: 244.5
Min nTPM: 159.2
Sample A Female 202.4
Sample B Female 244.5
Sample C Male 227.6
Sample D Male 159.2
Ventral hippocampus
nTPM: 224.6
Samples: 4

Max nTPM: 286.7
Min nTPM: 185.1
Sample A Female 203.6
Sample B Female 185.1
Sample C Male 286.7
Sample D Male 222.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 396.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 397.0
Samples: 4

Max nTPM: 464.9
Min nTPM: 337.8
Sample A Male 437.9
Sample B Male 464.9
Sample C Female 347.3
Sample D Female 337.8
Hippocampal formation
nTPM: 382.1
Samples: 4

Max nTPM: 456.2
Min nTPM: 315.4
Sample A Male 368.7
Sample B Male 388.2
Sample C Female 315.4
Sample D Female 456.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.6
68410536 Antisense, RP_041214_02_B01, Mouse strain C57BL/6J (56 days, male) 22.6

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